RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 ARID5BQ14865 1188 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 TAF5Q15542 800 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 TRIP6Q15654 476 aaKnown RBP15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 CAMK4Q16566 473 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 ZC3H12AQ5D1E8 599 aaKnown RBP15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 DBX2Q6ZNG2 339 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 MMS22LQ6ZRQ5 1243 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 CFAP52Q8N1V2 620 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 CARNMT1Q8N4J0 409 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 KDM1BQ8NB78 822 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 RSPH9Q9H1X1 276 aaPredicted RBP15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 IL21RQ9HBE5 538 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 POPDC2Q9HBU9 364 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 OSGEPQ9NPF4 335 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 TJP2Q9UDY2 1190 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 NEUROG3Q9Y4Z2 214 aa15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 MUC22E2RYF6 1773 aaPredicted RBP15.33■□□□□ 0.04
SDCCAG3-209ENST00000468963 DSPP15924 2871 aaKnown RBP15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 GTPBP10A4D1E9 387 aaKnown RBP15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 KCNU1A8MYU2 1149 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 H0Y626 953 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 CAPN9O14815 690 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 CBFA2T3O75081 653 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 TRIM16O95361 564 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 TRUB2O95900 331 aaKnown RBP15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 ASLP04424 464 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 ZNF883P0CG24 379 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 UBE2HP62256 183 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 PITX1P78337 314 aaPredicted RBP15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 ARHGAP44Q17R89 818 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 HNRNPA1L2Q32P51 320 aaKnown RBP15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 C9orf64Q5T6V5 341 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 SMYD5Q6GMV2 418 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 GBP6Q6ZN66 633 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 SHC3Q92529 594 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 ORAI3Q9BRQ5 295 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 TRIM62Q9BVG3 475 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 BTBD1Q9H0C5 482 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 KIAA1522Q9P206 1035 aaPredicted RBP15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 ERVW-1Q9UQF0 538 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 MSRB2Q9Y3D2 182 aa15.32■□□□□ 0.04
SDCCAG3-209ENST00000468963 A0A1B0GVT2 93 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SIN3BO75182 1162 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 LUC7L3O95232 432 aaKnown RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SEMA4FO95754 770 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 MOCS2O96007 188 aaPredicted RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 DNTTP04053 509 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 GLI1P08151 1106 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SRPRAP08240 638 aaKnown RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 TACR2P21452 398 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 PON1P27169 355 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 CTSOP43234 321 aaPredicted RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 CSNK1EP49674 416 aaKnown RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 PDCLQ13371 301 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 EXOC3L4Q17RC7 722 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 HLA-BQ31612 363 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 PITRM1Q5JRX3 1037 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 RAP1GAP2Q684P5 730 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 ZNF776Q68DI1 518 aaPredicted RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 IL27RAQ6UWB1 636 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 RAB44Q7Z6P3 723 aaPredicted RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 NAXDQ8IW45 347 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 LGI2Q8N0V4 545 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 CHCHD4Q8N4Q1 142 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 BIRC7Q96CA5 298 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 BTN2A3PQ96KV6 586 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SLC2A13Q96QE2 648 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 CPXM1Q96SM3 734 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 PRMT1Q99873 361 aaKnown RBP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 GAREM1Q9H706 876 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SGK2Q9HBY8 427 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SIX2Q9NPC8 291 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 APEX2Q9UBZ4 518 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SLCO3A1Q9UIG8 710 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 KLK13Q9UKR3 277 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 SCML1Q9UN30 329 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 PCDHGC3Q9UN70 934 aa15.31■□□□□ 0.04
SDCCAG3-209ENST00000468963 FREM2Q5SZK8 3169 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 TARSL2A2RTX5 802 aaKnown RBP15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 TYW5A2RUC4 315 aaKnown RBP15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 TTC34A8MYJ7 566 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 C10orf142B7Z368 130 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 APOEP02649 317 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 USP8P40818 1118 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 MATKP42679 507 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 ST8SIA6P61647 398 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 ZNF423Q2M1K9 1284 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 DPY19L2P1Q6NXN4 242 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 USP30Q70CQ3 517 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 GLRX5Q86SX6 157 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 APCDD1Q8J025 514 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 DEFB106AQ8N104 65 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 MLKLQ8NB16 471 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 PPP1R13BQ96KQ4 1090 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 FAM129BQ96TA1 746 aa15.3■□□□□ 0.04
SDCCAG3-209ENST00000468963 PABPC3Q9H361 631 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms