RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 TMC3Q7Z5M5 1100 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 MON1AQ86VX9 555 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ERICH1Q86X53 443 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 UNC45BQ8IWX7 931 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 GRK7Q8WTQ7 553 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 RNF25Q96BH1 459 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ZFYVE19Q96K21 471 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PABPC3Q9H361 631 aaKnown RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CISHQ9NSE2 258 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 NUDT5Q9UKK9 219 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 BDP1A6H8Y1 2624 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PRR23AA6NEV1 266 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 FAM187AA6NFU0 413 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CLDN5O00501 218 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 GYG2O15488 501 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ESRRAP11474 423 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 SOX5P35711 763 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CLCN5P51795 746 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 COPS2P61201 443 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 RUNX3Q13761 415 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CTC1Q2NKJ3 1217 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 UAP1L1Q3KQV9 507 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 AASDHQ4L235 1098 aaPredicted RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TANGO2Q6ICL3 276 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TMEM154Q6P9G4 183 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 FAM35AQ86V20 835 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ALYREFQ86V81 257 aaKnown RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PASD1Q8IV76 773 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 RHOT2Q8IXI1 618 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CMTM8Q8IZV2 173 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ARHGAP24Q8N264 748 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CCDC110Q8TBZ0 833 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 MAML1Q92585 1016 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PSMG2Q969U7 264 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TTC17Q96AE7 1141 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 TTC1Q99614 292 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 NUP85Q9BW27 656 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ZNF518BQ9C0D4 1074 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 PTPRHQ9HD43 1115 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 DLGAP2Q9P1A6 1054 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 CNOT8Q9UFF9 292 aaKnown RBP6.18□□□□□ -1.42
SHQ1-205ENST00000468371 ZFP69BQ9UJL9 534 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 HAO1Q9UJM8 370 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 WNT6Q9Y6F9 365 aa6.18□□□□□ -1.42
SHQ1-205ENST00000468371 GREB1LQ9C091 1923 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 MEI4A8MW99 385 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 FSCN2O14926 492 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 GFRA3O60609 400 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CFIP05156 583 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SLC2A3P11169 496 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RARGP13631 454 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CCND1P24385 295 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 LTBRP36941 435 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RANBP1P43487 201 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 YWHAGP61981 247 aaKnown RBP eCLIP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 IRX1P78414 480 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RAD51Q06609 339 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 NME3Q13232 169 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CUL2Q13617 745 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 FNDC3BQ53EP0 1204 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 FAM78AQ5JUQ0 283 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 BSPRYQ5W0U4 402 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SDCCAG8Q86SQ7 713 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 CACUL1Q86Y37 369 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RBBP8NLQ8NC74 664 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SPDYE1Q8NFV5 336 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 RAB3IL1Q8TBN0 382 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 ZNF564Q8TBZ8 553 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 AGAP11Q8TF27 550 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 TCEAL4Q96EI5 215 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 PCED1BQ96HM7 432 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 KLF6Q99612 283 aaPredicted RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 FERMT1Q9BQL6 677 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 MRPL45Q9BRJ2 306 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 FOXQ1Q9C009 403 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 INTS2Q9H0H0 1204 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SMG9Q9H0W8 520 aaKnown RBP6.17□□□□□ -1.42
SHQ1-205ENST00000468371 IKZF4Q9H2S9 585 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 KLHL11Q9NVR0 708 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 TRIM33Q9UPN9 1127 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 KNL1Q8NG31 2342 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 NEDD8-MDP1E9PL57 170 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 PIRO00625 290 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 GLP2RO95838 553 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SETSIPP0DME0 302 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 COMTP21964 271 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 PON1P27169 355 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SERPINB6P35237 376 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 WASP42768 502 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 FMO5P49326 533 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 KCNMA1Q12791 1236 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SPARCL1Q14515 664 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 PON2Q15165 354 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 LRRC36Q1X8D7 754 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 BBS9Q3SYG4 887 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SYCP2LQ5T4T6 812 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 ANO7Q6IWH7 933 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 SLC30A9Q6PML9 568 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 TAS1R3Q7RTX0 852 aa6.17□□□□□ -1.42
SHQ1-205ENST00000468371 MFSD6LQ8IWD5 586 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms