RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 DDX50Q9BQ39 737 aaKnown RBP25.37■■□□□ 1.65
PTCH1-210ENST00000468211 PCED1AQ9H1Q7 454 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 KIAA1468Q9P260 1216 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 SUN2Q9UH99 717 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 RWDD2AQ9UIY3 292 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.37■■□□□ 1.65
PTCH1-210ENST00000468211 NEUROG3Q9Y4Z2 214 aa25.37■■□□□ 1.65
PTCH1-210ENST00000468211 A0A1B0GVT2 93 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 IGLV3-25P01717 112 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 CSNK1EP49674 416 aaKnown RBP25.36■■□□□ 1.65
PTCH1-210ENST00000468211 TRIP6Q15654 476 aaKnown RBP25.36■■□□□ 1.65
PTCH1-210ENST00000468211 MEA1Q16626 185 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 ARHGAP44Q17R89 818 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 CREBRFQ8IUR6 639 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 LGI2Q8N0V4 545 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 WDTC1Q8N5D0 677 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 GAREM1Q9H706 876 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 FBRSQ9HAH7 460 aa25.36■■□□□ 1.65
PTCH1-210ENST00000468211 FNDC3AQ9Y2H6 1198 aaKnown RBP25.36■■□□□ 1.65
PTCH1-210ENST00000468211 CAPN9O14815 690 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 MED7O43513 233 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 SIN3BO75182 1162 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 LUC7L3O95232 432 aaKnown RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 SEMA4FO95754 770 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 TRUB2O95900 331 aaKnown RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 DNTTP04053 509 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 YWHAZP63104 245 aaKnown RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 ZBTB16Q05516 673 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 PDCLQ13371 301 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 EIF4EBP2Q13542 120 aaPredicted RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 HLA-BQ31612 363 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 PITRM1Q5JRX3 1037 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 RAP1GAP2Q684P5 730 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 ZNF776Q68DI1 518 aaPredicted RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 ZNF557Q8N988 423 aaPredicted RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 BIRC7Q96CA5 298 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 BTBD1Q9H0C5 482 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 RSPH9Q9H1X1 276 aaPredicted RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 POPDC2Q9HBU9 364 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 AJAP1Q9UKB5 411 aaPredicted RBP25.35■■□□□ 1.65
PTCH1-210ENST00000468211 PLXNB3Q9ULL4 1909 aa25.35■■□□□ 1.65
PTCH1-210ENST00000468211 CBFA2T3O75081 653 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 FGFR1OPO95684 399 aaKnown RBP25.34■■□□□ 1.65
PTCH1-210ENST00000468211 USP8P40818 1118 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 NUMBP49757 651 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 CDH18Q13634 790 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 HNRNPA1L2Q32P51 320 aaKnown RBP25.34■■□□□ 1.65
PTCH1-210ENST00000468211 LAYNQ6UX15 382 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 ENOSF1Q7L5Y1 443 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 RAB44Q7Z6P3 723 aaPredicted RBP25.34■■□□□ 1.65
PTCH1-210ENST00000468211 DHX40Q8IX18 779 aaKnown RBP25.34■■□□□ 1.65
PTCH1-210ENST00000468211 APCDD1Q8J025 514 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 PNPLA1Q8N8W4 532 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 THAP9Q9H5L6 903 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 SERGEFQ9UGK8 458 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 RALYQ9UKM9 306 aaKnown RBP25.34■■□□□ 1.65
PTCH1-210ENST00000468211 ERVW-1Q9UQF0 538 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 MSRB2Q9Y3D2 182 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 PTPRBP23467 1997 aa25.34■■□□□ 1.65
PTCH1-210ENST00000468211 TYW5A2RUC4 315 aaKnown RBP25.33■■□□□ 1.65
PTCH1-210ENST00000468211 TTC34A8MYJ7 566 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 APOEP02649 317 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 ASLP04424 464 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 TACR2P21452 398 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 MATKP42679 507 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 HNRNPDQ14103 355 aaKnown RBP25.33■■□□□ 1.65
PTCH1-210ENST00000468211 CHSY1Q86X52 802 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 PASD1Q8IV76 773 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 CPXM1Q96SM3 734 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 ORAI3Q9BRQ5 295 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 TM9SF3Q9HD45 589 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 TM7SF3Q9NS93 570 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 APEX2Q9UBZ4 518 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 SLCO3A1Q9UIG8 710 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 PCOLCE2Q9UKZ9 415 aa25.33■■□□□ 1.65
PTCH1-210ENST00000468211 DMXL2Q8TDJ6 3036 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 H0Y626 953 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 FSBPO95073 299 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 PON1P27169 355 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 ST8SIA6P61647 398 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 KIF19Q2TAC6 998 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 C9orf64Q5T6V5 341 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 GBP6Q6ZN66 633 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 CIR1Q86X95 450 aaPredicted RBP25.32■■□□□ 1.64
PTCH1-210ENST00000468211 SHC3Q92529 594 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 BTN2A3PQ96KV6 586 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 PRMT1Q99873 361 aaKnown RBP25.32■■□□□ 1.64
PTCH1-210ENST00000468211 PABPC3Q9H361 631 aaKnown RBP25.32■■□□□ 1.64
PTCH1-210ENST00000468211 SGK2Q9HBY8 427 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 SIX2Q9NPC8 291 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 PCDHB9Q9Y5E1 797 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 SNX11Q9Y5W9 270 aa25.32■■□□□ 1.64
PTCH1-210ENST00000468211 TRIM16O95361 564 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 CER1O95813 267 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 IGHV4-34P06331 123 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 FTH1P19P0C7X4 201 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 ZNF883P0CG24 379 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 AFF3P51826 1226 aaKnown RBP25.31■■□□□ 1.64
PTCH1-210ENST00000468211 ARID5BQ14865 1188 aa25.31■■□□□ 1.64
PTCH1-210ENST00000468211 ZNF423Q2M1K9 1284 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms