RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 ANKRD40Q6AI12 368 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 DHRS13Q6UX07 377 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 FAM57BQ71RH2 274 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 SKAP1Q86WV1 359 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 ZNF366Q8N895 744 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 Q8N9P0 234 aaPredicted RBP4.24□□□□□ -1.73
VPS50-209ENST00000467326 WIPF2Q8TF74 440 aaPredicted RBP4.24□□□□□ -1.73
VPS50-209ENST00000467326 KAT2BQ92831 832 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 TRIM63Q969Q1 353 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 MPP4Q96JB8 637 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 MOV10Q9HCE1 1003 aaKnown RBP4.24□□□□□ -1.73
VPS50-209ENST00000467326 ERVK-5Q9HDB9 667 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 PLCB1Q9NQ66 1216 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 TMEM45AQ9NWC5 275 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 HEY2Q9UBP5 337 aa4.24□□□□□ -1.73
VPS50-209ENST00000467326 SPATA31A5Q5VU36 1347 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 RPGRIP1LQ68CZ1 1315 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 SPATA31A7Q8IWB4 1347 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 NKX2-8O15522 239 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 TMEM191BP0C7N4 346 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 KLRK1P26718 216 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 TAS2R50P59544 299 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 CHAF1AQ13111 956 aaPredicted RBP4.23□□□□□ -1.73
VPS50-209ENST00000467326 SIM2Q14190 667 aaPredicted RBP4.23□□□□□ -1.73
VPS50-209ENST00000467326 AAK1Q2M2I8 961 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 TRIM71Q2Q1W2 868 aaKnown RBP4.23□□□□□ -1.73
VPS50-209ENST00000467326 ANXA2RQ3ZCQ2 193 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 RINT1Q6NUQ1 792 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 WDR93Q6P2C0 686 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 C1orf228Q6PIY5 440 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 ZNF474Q6S9Z5 364 aaPredicted RBP4.23□□□□□ -1.73
VPS50-209ENST00000467326 TECPR1Q7Z6L1 1165 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 TRABD2AQ86V40 505 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 RHPN2Q8IUC4 686 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.23□□□□□ -1.73
VPS50-209ENST00000467326 NRSN1Q8IZ57 195 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 ARFGAP1Q8N6T3 406 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 BCAS4Q8TDM0 211 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 WDR60Q8WVS4 1066 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 MCRS1Q96EZ8 462 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 ZFYVE19Q96K21 471 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 GPR78Q96P69 363 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 TRMOQ9BU70 441 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 TP63Q9H3D4 680 aaPredicted RBP4.23□□□□□ -1.73
VPS50-209ENST00000467326 PAPOLBQ9NRJ5 636 aaKnown RBP4.23□□□□□ -1.73
VPS50-209ENST00000467326 NFU1Q9UMS0 254 aa4.23□□□□□ -1.73
VPS50-209ENST00000467326 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.23□□□□□ -1.73
VPS50-209ENST00000467326 LOC105369274A0A096LPK9 316 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 LOC102723532A0A0G2JNH3 316 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 GOLGA6L3A6NEY3 463 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 M0QYT0 321 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 FFAR2O15552 330 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 PPP6R2O75170 966 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 CNTN5O94779 1100 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 ALDOAP04075 364 aaKnown RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 ENO1P06733 434 aaKnown RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 SERPINB3P29508 390 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 IL6STP40189 918 aaPredicted RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 SLC37A1P57057 533 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 TLE3Q04726 772 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 MAPK7Q13164 816 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 DDX10Q13206 875 aaKnown RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 MTX1Q13505 466 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 KRT72Q14CN4 511 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 CCDC96Q2M329 555 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 EARS2Q5JPH6 523 aaKnown RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 TOGARAM2Q6ZUX3 1019 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 CREBRFQ8IUR6 639 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 ADGRF4Q8IZF3 695 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 OR4N4Q8N0Y3 316 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 ADPRHL1Q8NDY3 354 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 SRFBP1Q8NEF9 429 aaKnown RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 VPS37AQ8NEZ2 397 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 FAM71BQ8TC56 605 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 ERP27Q96DN0 273 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 ABHD14AQ9BUJ0 271 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 FOXP1Q9H334 677 aaPredicted RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 IPO11Q9UI26 975 aaKnown RBP4.22□□□□□ -1.73
VPS50-209ENST00000467326 SLC8A2Q9UPR5 921 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 B3GNT3Q9Y2A9 372 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 LRCH1Q9Y2L9 728 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 HS3ST3B1Q9Y662 390 aa4.22□□□□□ -1.73
VPS50-209ENST00000467326 ZNF335Q9H4Z2 1342 aaPredicted RBP4.21□□□□□ -1.73
VPS50-209ENST00000467326 A0A087WV62 115 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 C3orf70A6NLC5 250 aaPredicted RBP4.21□□□□□ -1.74
VPS50-209ENST00000467326 KIF28PB7ZC32 967 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 FIBPO43427 364 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 SGPL1O95470 568 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 RFPL3SP0C7P2 107 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 SETSIPP0DME0 302 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 B4GALNT1Q00973 533 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 TNFAIP2Q03169 654 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 SPARCL1Q14515 664 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 PGM5Q15124 567 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 BTBD16Q32M84 506 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 ZNF260Q3ZCT1 412 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 FAM133BQ5BKY9 247 aaKnown RBP4.21□□□□□ -1.74
VPS50-209ENST00000467326 LIPMQ5VYY2 423 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 JAKMIP3Q5VZ66 844 aa4.21□□□□□ -1.74
VPS50-209ENST00000467326 AWAT2Q6E213 333 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms