RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CIPCQ9C0C6 399 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 TAOK3Q9H2K8 898 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 TMLHEQ9NVH6 421 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 ZDHHC7Q9NXF8 308 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 ALKBH4Q9NXW9 302 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 MTMR4Q9NYA4 1195 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 SLC25A13Q9UJS0 675 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 RABGAP1Q9Y3P9 1069 aa4.53□□□□□ -1.68
VPS13A-209ENST00000467124 SETD1BQ9UPS6 1966 aaKnown RBP4.53□□□□□ -1.68
VPS13A-209ENST00000467124 SH2D7A6NKC9 451 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 SAC3D1A6NKF1 404 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 DOK2O60496 412 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 TTLL1O95922 423 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 ARSAP15289 507 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 PRPH2P23942 346 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 SLC8A1P32418 973 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 STAT6P42226 847 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 WDR5P61964 334 aaKnown RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 MRPS35P82673 323 aaKnown RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 TLE3Q04726 772 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 DCTN2Q13561 401 aaKnown RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 THOC5Q13769 683 aaKnown RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 PDE1CQ14123 709 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 ERV3-1Q14264 604 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 MFSD13AQ14CX5 517 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 FAM205BPQ63HN1 556 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 USP51Q70EK9 711 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 WDR53Q7Z5U6 358 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 ADGRG6Q86SQ4 1221 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 RASAL3Q86YV0 1011 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 ARMC8Q8IUR7 673 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 C12orf76Q8N812 135 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 ACTRT2Q8TDY3 377 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 GLMPQ8WWB7 406 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 C7orf26Q96N11 449 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 EYA3Q99504 573 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 ADGRE3Q9BY15 652 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 TRIM31Q9BZY9 425 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 INTS2Q9H0H0 1204 aaKnown RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 PRDM13Q9H4Q3 707 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 SLC32A1Q9H598 525 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 ASNSD1Q9NWL6 643 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 SLC45A1Q9Y2W3 748 aa4.52□□□□□ -1.69
VPS13A-209ENST00000467124 HEMK1Q9Y5R4 338 aaPredicted RBP4.52□□□□□ -1.69
VPS13A-209ENST00000467124 A0A087X0M5 115 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 A0A1B0GX30 115 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 PI4KAP2A4QPH2 592 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FAM90A7PA6NKC0 464 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FAM90A22PA8MWA6 464 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FAM90A12PA8MX19 464 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FAM90A23PA8MXZ1 464 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 SNAP23O00161 211 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FIBPO43427 364 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ZBED4O75132 1171 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 TIPRLO75663 272 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 F9P00740 461 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 SLC3A2P08195 630 aaKnown RBP4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ADRB1P08588 477 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ALDOCP09972 364 aaKnown RBP4.51□□□□□ -1.69
VPS13A-209ENST00000467124 APEHP13798 732 aaKnown RBP4.51□□□□□ -1.69
VPS13A-209ENST00000467124 NDUFS1P28331 727 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 CCT8P50990 548 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 CDH15P55291 814 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ARHGAP8P85298 464 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 SETQ01105 290 aaPredicted RBP4.51□□□□□ -1.69
VPS13A-209ENST00000467124 SEC23BQ15437 767 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 CNGA3Q16281 694 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 BAK1Q16611 211 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FBXO43Q4G163 708 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FNDC7Q5VTL7 733 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 NAPEPLDQ6IQ20 393 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 DENND1BQ6P3S1 775 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 MTFR2Q6P444 385 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 MON1AQ86VX9 555 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ADAMTS18Q8TE60 1221 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 C2CD4CQ8TF44 421 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 LINC00476Q8WZB0 136 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 CAVIN3Q969G5 261 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 SNX18Q96RF0 628 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FUZQ9BT04 418 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ABHD14AQ9BUJ0 271 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FSD1LQ9BXM9 530 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 LMAN2LQ9H0V9 348 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 VEZTQ9HBM0 779 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 SEMA4BQ9NPR2 832 aaPredicted RBP4.51□□□□□ -1.69
VPS13A-209ENST00000467124 IL17RBQ9NRM6 502 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 SERTAD4Q9NUC0 356 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 LRIT1Q9P2V4 623 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 FBXO4Q9UKT5 387 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 LAS1LQ9Y4W2 734 aaKnown RBP4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ENTPD2Q9Y5L3 495 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 PIAS3Q9Y6X2 628 aa4.51□□□□□ -1.69
VPS13A-209ENST00000467124 ANKRD18BA2A2Z9 1011 aa4.5□□□□□ -1.69
VPS13A-209ENST00000467124 C16orf96A6NNT2 1141 aa4.5□□□□□ -1.69
VPS13A-209ENST00000467124 GCOM1H8Y6P7 765 aaPredicted RBP4.5□□□□□ -1.69
VPS13A-209ENST00000467124 CLIC1O00299 241 aa4.5□□□□□ -1.69
VPS13A-209ENST00000467124 PRYO14603 147 aa4.5□□□□□ -1.69
VPS13A-209ENST00000467124 TSPAN4O14817 238 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms