RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 RGS7P49802 495 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 GPX6P59796 221 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 ARHGAP8P85298 464 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 PTPN11Q06124 597 aaPredicted RBP18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 ISLR2Q6UXK2 745 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 RFX6Q8HWS3 928 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 TRIML2Q8N7C3 387 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 DDHD1Q8NEL9 900 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 PPP4R1Q8TF05 950 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 DRC3Q9H069 523 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 C2orf40Q9H1Z8 148 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 THRAP10827 490 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 ZNF23P17027 643 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 CDH5P33151 784 aaPredicted RBP18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 HSPA13P48723 471 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 EPHB1P54762 984 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 ALDH18A1P54886 795 aaKnown RBP18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 GRM1Q13255 1194 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 KLHL38Q2WGJ6 581 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 RARS2Q5T160 578 aaKnown RBP18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 FAM102AQ5T9C2 384 aaPredicted RBP18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 ELMSAN1Q6PJG2 1045 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 DCDC5Q6ZRR9 648 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 LZTR1Q8N653 840 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 POU5F2Q8N7G0 328 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 CPT1BQ92523 772 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 LPIN3Q9BQK8 851 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 WDR83Q9BRX9 315 aaKnown RBP18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 SMARCAD1Q9H4L7 1026 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 CLEC11AQ9Y240 323 aa18.53■□□□□ 0.56
SNAPC3-205ENST00000467062 H3BNX3 289 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 MT-ND3P03897 115 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 AOC1P19801 751 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 HMOX2P30519 316 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 RPL22P35268 128 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 SLC25A3Q00325 362 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 ZBTB17Q13105 803 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 SLC10A6Q3KNW5 377 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 PGM2L1Q6PCE3 622 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 CCDC33Q8N5R6 958 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 RSAD2Q8WXG1 361 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 C7orf26Q96N11 449 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 PEBP4Q96S96 227 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 GPATCH1Q9BRR8 931 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 NUF2Q9BZD4 464 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 IGSF9Q9P2J2 1179 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 DRG1Q9Y295 367 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 GIT1Q9Y2X7 761 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 SQORQ9Y6N5 450 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 SOBPA7XYQ1 873 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 MEI4A8MW99 385 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 NDUFB5O43674 189 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 BAIAP3O94812 1187 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 C22orf31O95567 290 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 ITGAVP06756 1048 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 CDH3P22223 829 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 ETV4P43268 484 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 BASP1P80723 227 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 HIF1AQ16665 826 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 TRNP1Q6NT89 227 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 NIPAL1Q6NVV3 410 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 PQLC1Q8N2U9 271 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 NKD2Q969F2 451 aaPredicted RBP18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 TMEM176AQ96HP8 235 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 RILPQ96NA2 401 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 GPATCH2LQ9NWQ4 482 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 DDX56Q9NY93 547 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 RABGEF1Q9UJ41 708 aa18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 HEMK1Q9Y5R4 338 aaPredicted RBP18.52■□□□□ 0.56
SNAPC3-205ENST00000467062 MCM3APO60318 1980 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 AVILO75366 819 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 C6orf222P0C671 652 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 ARF4P18085 180 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 IREB2P48200 963 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 EIF2B2P49770 351 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 MORF4L2Q15014 288 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 SURF1Q15526 300 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 BBS9Q3SYG4 887 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 DRICH1Q6PGQ1 229 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 MZB1Q8WU39 189 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 FAM111AQ96PZ2 611 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 PAFAH2Q99487 392 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 USP18Q9UMW8 372 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 PSMD13Q9UNM6 376 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 TNFSF13BQ9Y275 285 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 EVPLQ92817 2033 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 CLUHO75153 1309 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 SF3B1O75533 1304 aaKnown RBP eCLIP18.51■□□□□ 0.555e-6■■■■■ 75
SNAPC3-205ENST00000467062 HBP1O60381 514 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 TMEM63AO94886 807 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 CYP3A5P20815 502 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 ZNF829Q3KNS6 432 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 ATG16L1Q676U5 607 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 SCYL2Q6P3W7 929 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 PAOXQ6QHF9 649 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 KBTBD6Q86V97 674 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 ERO1BQ86YB8 467 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 TMEM126BQ8IUX1 230 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 NIPA2Q8N8Q9 360 aa18.51■□□□□ 0.55
SNAPC3-205ENST00000467062 HIPK4Q8NE63 616 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms