RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 METTL18O95568 372 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 CHRM5P08912 532 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 CSF1P09603 554 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 KRT4P19013 534 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 TNFRSF1AP19438 455 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 NDUFS1P28331 727 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 GPD2P43304 727 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 RXRGP48443 463 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 RPS6KA3P51812 740 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 OAZ1P54368 228 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 SLC37A1P57057 533 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 GEMIN4P57678 1058 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 PFKFB3Q16875 520 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 ACAD10Q6JQN1 1059 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 SERPINA13PQ6UXR4 307 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 DSTYKQ6XUX3 929 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 HEATR4Q86WZ0 1026 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 GALNT4Q8N4A0 578 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 ZCCHC10Q8TBK6 192 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 STAMQ92783 540 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 REPS1Q96D71 796 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 RRP36Q96EU6 259 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 HERC2P3Q9BVR0 1158 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARHGAP39Q9C0H5 1083 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 ERVK-5Q9HDB9 667 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 THAP1Q9NVV9 213 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 CYP46A1Q9Y6A2 500 aa4.83□□□□□ -1.64
CDC42BPA-211ENST00000466538 A0A087X1B8 175 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 F5H0A9 414 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 PRRG2O14669 202 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 CCNT1O60563 726 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 CD4P01730 458 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 PEPDP12955 493 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 TACR2P21452 398 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 TGM2P21980 687 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 PLA2G5P39877 138 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 VPS41P49754 854 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 ADPRHP54922 357 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 EIF5P55010 431 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 DMWDQ09019 674 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 CAMK1Q14012 370 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 RUNDC3AQ59EK9 446 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 KIAA1324Q6UXG2 1013 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 RANBP10Q6VN20 620 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 PCGF5Q86SE9 256 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 C16orf71Q8IYS4 520 aaPredicted RBP4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 NOC3LQ8WTT2 800 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 CELF1Q92879 486 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 GPR78Q96P69 363 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 CD180Q99467 661 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 MACROD1Q9BQ69 325 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 FUZQ9BT04 418 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 NUAK2Q9H093 628 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 IRAK4Q9NWZ3 460 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 PPP1R14DQ9NXH3 145 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 KLQ9UEF7 1012 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 TLK1Q9UKI8 766 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARHGAP26Q9UNA1 814 aa4.82□□□□□ -1.64
CDC42BPA-211ENST00000466538 NCANO14594 1321 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 GOLGA6L10A0A0M3HER8 536 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 SH2D7A6NKC9 451 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 PEX12O00623 359 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 DSCR3O14972 297 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 USP12O75317 370 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 CNTN5O94779 1100 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 TMEM63AO94886 807 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 HNRNPA1P09651 372 aaKnown RBP eCLIP4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ALDOCP09972 364 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 WEE2P0C1S8 567 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ATP1A3P13637 1013 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARSAP15289 507 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 GPD1P21695 349 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 PRPH2P23942 346 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 MAN1A1P33908 653 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 MVDP53602 400 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 CASP6P55212 293 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 LMOD3Q0VAK6 560 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 GPR68Q15743 365 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 AKNAD1Q5T1N1 836 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 SLC9C2Q5TAH2 1124 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 WDR78Q5VTH9 848 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 CLEC4GQ6UXB4 293 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 MRGPRGQ86SM5 289 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARMC8Q8IUR7 673 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 UEVLDQ8IX04 471 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ADGRF3Q8IZF5 1079 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 NCSTNQ92542 709 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ATP2A3Q93084 1043 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 SARAFQ96BY9 339 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 RNF125Q96EQ8 232 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ZNF764Q96H86 408 aaPredicted RBP4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 APOPT1Q96IL0 206 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 AGXT2Q9BYV1 514 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 TRIM31Q9BZY9 425 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 CLPBQ9H078 707 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 STN1Q9H668 368 aaKnown RBP4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 CPNE5Q9HCH3 593 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ASNSD1Q9NWL6 643 aa4.81□□□□□ -1.64
CDC42BPA-211ENST00000466538 ADAM21Q9UKJ8 722 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms