RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 TKTL2Q9H0I9 626 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 SLC6A17Q9H1V8 727 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 PIGVQ9NUD9 493 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 SPTLC3Q9NUV7 552 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 ADAM22Q9P0K1 906 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 GGA2Q9UJY4 613 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 STOML2Q9UJZ1 356 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 VANGL2Q9ULK5 521 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 LHX6Q9UPM6 363 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 PCDHGA10Q9Y5H3 936 aa10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.08□□□□□ -0.8
RTFDC1-205ENST00000466260 TNRC6BQ9UPQ9 1833 aaKnown RBP10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 KCNU1A8MYU2 1149 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 KIF2AO00139 706 aaPredicted RBP10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 SKILP12757 684 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 UNGP13051 313 aaPredicted RBP10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 MMP8P22894 467 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 IL12RB1P42701 662 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 IRAK1P51617 712 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 CENPCQ03188 943 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 LMAN2Q12907 356 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF234Q14588 700 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 FNDC3BQ53EP0 1204 aaKnown RBP10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 RAB6CQ53S08 254 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 TMEM215Q68D42 235 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 MBLAC2Q68D91 279 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 KIAA1324Q6UXG2 1013 aaKnown RBP10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 FAM131BQ86XD5 332 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 SUMF1Q8NBK3 374 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 RXFP2Q8WXD0 754 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 NPY6RQ99463 290 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 XPO4Q9C0E2 1151 aaKnown RBP10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 TTYH3Q9C0H2 523 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 RAB6CQ9H0N0 254 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 EPC1Q9H2F5 836 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 HAUS4Q9H6D7 363 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 WDCPQ9H6R7 721 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 CD93Q9NPY3 652 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 ANLNQ9NQW6 1124 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 ELOVL2Q9NXB9 296 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 TAS2R14Q9NYV8 317 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 IMPACTQ9P2X3 320 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 FBXO10Q9UK96 956 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 GMEB2Q9UKD1 530 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 SLC27A6Q9Y2P4 619 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 HS3ST4Q9Y661 456 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 STON1Q9Y6Q2 735 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 ABCA7Q8IZY2 2146 aa10.07□□□□□ -0.8
RTFDC1-205ENST00000466260 ADAMTS9Q9P2N4 1935 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 A0A0A0MRY4 1105 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 GFRA2O00451 464 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 CCP110O43303 1012 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 PAGE1O75459 146 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 LUC7L3O95232 432 aaKnown RBP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 CALB1P05937 261 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 EPHX1P07099 455 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SLC2A3P11169 496 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 GABRG2P18507 467 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 POLR2EP19388 210 aaKnown RBP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 PRKCHP24723 683 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SDC4P31431 198 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 RDXP35241 583 aaKnown RBP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 CSKP41240 450 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 KLHL30Q0D2K2 578 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 PTP4A2Q12974 167 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 CCDC6Q16204 474 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SLC25A52Q3SY17 297 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 FUT11Q495W5 492 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 HSF5Q4G112 596 aaPredicted RBP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 FSCBQ5H9T9 825 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 RABGAP1LQ5R372 815 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 DNAJC24Q6P3W2 148 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SERPINA13PQ6UXR4 307 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 MON1BQ7L1V2 547 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 ARMCX6Q7L4S7 300 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF571Q7Z3V5 609 aaPredicted RBP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 IRF2BP2Q7Z5L9 587 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 C14orf80Q86SX3 495 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 KBTBD6Q86V97 674 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 DRC7Q8IY82 874 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 AHI1Q8N157 1196 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 CCAR2Q8N163 923 aaKnown RBP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 FAM160A2Q8N612 972 aaPredicted RBP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 FRMD1Q8N878 549 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 WFIKKN2Q8TEU8 576 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 GAB3Q8WWW8 586 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 IGSF8Q969P0 613 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 AZIN2Q96A70 460 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 MCEEQ96PE7 176 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 EPAS1Q99814 870 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SLC2A11Q9BYW1 496 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SEMA4AQ9H3S1 761 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 RRN3Q9NYV6 651 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 TMEM59LQ9UK28 342 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 STARD13Q9Y3M8 1113 aa10.06□□□□□ -0.8
RTFDC1-205ENST00000466260 SDK1Q7Z5N4 2213 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms