RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 AP5M1Q9H0R1 490 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 NUDT5Q9UKK9 219 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 SMIM35A0A1B0GVV1 85 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 F2P00734 622 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 ITGA2BP08514 1039 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 FDFT1P37268 417 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 PNPLA4P41247 253 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 CERCAMQ5T4B2 595 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 ZC3H15Q8WU90 426 aaKnown RBP16.79■□□□□ 0.28
SLX4-202ENST00000466154 WNT8BQ93098 351 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 DNAI2Q9GZS0 605 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 INPP5FQ9Y2H2 1132 aa16.79■□□□□ 0.28
SLX4-202ENST00000466154 ARHGAP42A6NI28 874 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 UBXN11Q5T124 520 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 HIPK4Q8NE63 616 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 MFSD3Q96ES6 412 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 PARK7Q99497 189 aaKnown RBP16.78■□□□□ 0.28
SLX4-202ENST00000466154 C11orf84Q9BUA3 381 aaPredicted RBP16.78■□□□□ 0.28
SLX4-202ENST00000466154 PNPOQ9NVS9 261 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 LOC100653049A0A140TA62 436 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 C17orf102A2RUQ5 167 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 PTGESO14684 152 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 DGKIO75912 1065 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 KRT34O76011 436 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
SLX4-202ENST00000466154 BAG2O95816 211 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 POLBP06746 335 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 CHRM1P11229 460 aaPredicted RBP16.78■□□□□ 0.28
SLX4-202ENST00000466154 SERPINB9P50453 376 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 WASHC5Q12768 1159 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 PEX6Q13608 980 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 ITGA9Q13797 1035 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 ACSBG2Q5FVE4 666 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 STRA8Q7Z7C7 330 aa16.78■□□□□ 0.28
SLX4-202ENST00000466154 TSPYL2Q9H2G4 693 aaPredicted RBP16.78■□□□□ 0.28
SLX4-202ENST00000466154 HBS1LQ9Y450 684 aaKnown RBP16.78■□□□□ 0.28
SLX4-202ENST00000466154 TRIP12Q14669 1992 aaPredicted RBP16.78■□□□□ 0.28
SLX4-202ENST00000466154 ZBTB24O43167 697 aaPredicted RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 CRHR1P34998 444 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 SLC1A6P48664 564 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 HSF5Q4G112 596 aaPredicted RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 OTUD1Q5VV17 481 aaPredicted RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 EFCAB3Q8N7B9 438 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 RBM15BQ8NDT2 890 aaKnown RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 PCED1BQ96HM7 432 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 SYT15Q9BQS2 421 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 CRTAC1Q9NQ79 661 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 TMEM216Q9P0N5 145 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 DFFAO00273 331 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 POMCP01189 267 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 MAGEA3P43357 314 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 GPR162Q16538 588 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 EML3Q32P44 896 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 LRRC8BQ6P9F7 803 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 WDR75Q8IWA0 830 aaKnown RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 ARNTL2Q8WYA1 636 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 CCDC124Q96CT7 223 aaKnown RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 FCRL3Q96P31 734 aaPredicted RBP16.77■□□□□ 0.28
SLX4-202ENST00000466154 MAN1C1Q9NR34 630 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 TMEM30AQ9NV96 361 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 MOCS1Q9NZB8 636 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 MORF4L1Q9UBU8 362 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 USP3Q9Y6I4 520 aa16.77■□□□□ 0.28
SLX4-202ENST00000466154 OPHN1O60890 802 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 TGDSO95455 350 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 JCHAINP01591 159 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 PGAM1P18669 254 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 SCNN1GP51170 649 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 OCRLQ01968 901 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 RAPH1Q70E73 1250 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 FBXO41Q8TF61 875 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 GTF3C2Q8WUA4 911 aaPredicted RBP16.77■□□□□ 0.27
SLX4-202ENST00000466154 OLFM3Q96PB7 478 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 HNRNPABQ99729 332 aaKnown RBP16.77■□□□□ 0.27
SLX4-202ENST00000466154 GDAP2Q9NXN4 497 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 LNPEPQ9UIQ6 1025 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 DOCK3Q8IZD9 2030 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 NUP205Q92621 2012 aa16.77■□□□□ 0.27
SLX4-202ENST00000466154 SPECC1L-ADORA2AF8WAN1 911 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 DAB1O75553 588 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 ZMPSTE24O75844 475 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 ADRA1BP35368 520 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 AVPR1AP37288 418 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 PSEN1P49768 467 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 C4orf22Q6V702 233 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 NPWQ8N729 165 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 PPP4R1Q8TF05 950 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 TTC1Q99614 292 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 KCNK4Q9NYG8 393 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 SIRPGQ9P1W8 387 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 VANGL2Q9ULK5 521 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 I6L893 689 aaPredicted RBP16.76■□□□□ 0.27
SLX4-202ENST00000466154 EPHB1P54762 984 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 USP4Q13107 963 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 SPNS2Q8IVW8 549 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 CERS2Q96G23 380 aa16.76■□□□□ 0.27
SLX4-202ENST00000466154 TKTL2Q9H0I9 626 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms