RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 MID1O15344 667 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 LDOC1O95751 146 aaPredicted RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 C1SP09871 688 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 JUPP14923 745 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 POLR2EP19388 210 aaKnown RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 SLC6A4P31645 630 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 MXI1P50539 228 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 SEMG2Q02383 582 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 CST6Q15828 149 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 HNRNPA1L2Q32P51 320 aaKnown RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 FOXD4L6Q3SYB3 417 aaPredicted RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 ZCWPW2Q504Y3 356 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 MPP7Q5T2T1 576 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 PIK3R6Q5UE93 754 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 FOXD4L5Q5VV16 416 aaPredicted RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 BSPRYQ5W0U4 402 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 KRT39Q6A163 491 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 RFWD3Q6PCD5 774 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 FOXD4L3Q6VB84 417 aaPredicted RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 CCDC150Q8NCX0 1101 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 FOXD4L4Q8WXT5 416 aaPredicted RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 TATDN2Q93075 761 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 TTC17Q96AE7 1141 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 MRGPRX3Q96LB0 322 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 PRICKLE1Q96MT3 831 aaPredicted RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 FCRL3Q96P31 734 aaPredicted RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 NRSN2Q9GZP1 204 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 FBXL12Q9NXK8 326 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 SUN2Q9UH99 717 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 ADAMTS1Q9UHI8 967 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 TSPAN16Q9UKR8 245 aa12.24□□□□□ -0.45
CNOT4-208ENST00000465721 INTS6Q9UL03 887 aaKnown RBP12.24□□□□□ -0.45
CNOT4-208ENST00000465721 RP1P56715 2156 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 TRPM6Q9BX84 2022 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 A0A1W2PP55 124 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 YKT6O15498 198 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 TBL1XO60907 577 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 ITGAVP06756 1048 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 CDK4P11802 303 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 KRT13P13646 458 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 PLA2G2AP14555 144 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 ABCB4P21439 1286 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 GTF2H1P32780 548 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 PSMC2P35998 433 aaKnown RBP12.23□□□□□ -0.45
CNOT4-208ENST00000465721 SLC8A3P57103 927 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
CNOT4-208ENST00000465721 TARDBPQ13148 414 aaKnown RBP eCLIP12.23□□□□□ -0.458e-8■■■■□ 26.5
CNOT4-208ENST00000465721 ARID5BQ14865 1188 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 SFMBT2Q5VUG0 894 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 PCSK4Q6UW60 755 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 KANSL1Q7Z3B3 1105 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 EID2Q8N6I1 236 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 LSM14AQ8ND56 463 aaKnown RBP12.23□□□□□ -0.45
CNOT4-208ENST00000465721 OR2T34Q8NGX1 318 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 GANCQ8TET4 914 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 RNF139Q8WU17 664 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 MYEOVQ96EZ4 313 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 IRX2Q9BZI1 471 aaPredicted RBP12.23□□□□□ -0.45
CNOT4-208ENST00000465721 NEUROG2Q9H2A3 272 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 LRRC4Q9HBW1 653 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 FZD4Q9ULV1 537 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 NCKAP1Q9Y2A7 1128 aa12.23□□□□□ -0.45
CNOT4-208ENST00000465721 ITIH6Q6UXX5 1313 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 GOLGA6L7A0A1B0GV03 622 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 LRRC72A6NJI9 287 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 IRAK2O43187 625 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 RHOBTB3O94955 611 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 ASLP04424 464 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 MYL1P05976 194 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 CD38P28907 300 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 CSKP41240 450 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 CCR5P51681 352 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 ADPRHP54922 357 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 NXPH1P58417 271 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 DAOAP59103 153 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 PKDCCQ504Y2 493 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 C9orf64Q5T6V5 341 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 NADSYN1Q6IA69 706 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 LRRC69Q6ZNQ3 347 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 MFN1Q8IWA4 741 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 DHX40Q8IX18 779 aaKnown RBP12.22□□□□□ -0.45
CNOT4-208ENST00000465721 SCML4Q8N228 414 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 ZNF843Q8N446 348 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 AADATQ8N5Z0 425 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 KDM1BQ8NB78 822 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 SKA1Q96BD8 255 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 IPO9Q96P70 1041 aaKnown RBP12.22□□□□□ -0.45
CNOT4-208ENST00000465721 AASDHPPTQ9NRN7 309 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 ABCC13Q9NSE7 274 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 AK5Q9Y6K8 562 aa12.22□□□□□ -0.45
CNOT4-208ENST00000465721 TTC34A8MYJ7 566 aa12.21□□□□□ -0.45
CNOT4-208ENST00000465721 O00370 1275 aa12.21□□□□□ -0.45
CNOT4-208ENST00000465721 RRP8O43159 456 aaKnown RBP12.21□□□□□ -0.45
CNOT4-208ENST00000465721 BRINP1O60477 761 aa12.21□□□□□ -0.45
CNOT4-208ENST00000465721 ACSL4O60488 711 aa12.21□□□□□ -0.45
CNOT4-208ENST00000465721 RNASEH1O60930 286 aaKnown RBP12.21□□□□□ -0.45
CNOT4-208ENST00000465721 RNASEH2AO75792 299 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms