RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 JAM2P57087 298 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 TYRO3Q06418 890 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 ZNF33AQ06730 810 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 NME3Q13232 169 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 PEAR1Q5VY43 1037 aaPredicted RBP22.53■■□□□ 1.2
LIME1-203ENST00000465591 XYLT1Q86Y38 959 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 ATP6V0D2Q8N8Y2 350 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 TTC17Q96AE7 1141 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 SIPA1Q96FS4 1042 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 ANLNQ9NQW6 1124 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 ITM2CQ9NQX7 267 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 PLA2G4CQ9UP65 541 aa22.53■■□□□ 1.2
LIME1-203ENST00000465591 TYW5A2RUC4 315 aaKnown RBP22.52■■□□□ 1.2
LIME1-203ENST00000465591 CHRNB2P17787 502 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 CCR1P32246 355 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 NOS2P35228 1153 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 GGCXP38435 758 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 CTSOP43234 321 aaPredicted RBP22.52■■□□□ 1.2
LIME1-203ENST00000465591 TPMTP51580 245 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 IRAK1P51617 712 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 RNASE9P60153 205 aaKnown RBP22.52■■□□□ 1.2
LIME1-203ENST00000465591 NOMO3P69849 1222 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 CDH18Q13634 790 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 E2F5Q15329 346 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 SYCP1Q15431 976 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 TRIM61Q5EBN2 209 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 FKBP15Q5T1M5 1219 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 TRNP1Q6NT89 227 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 OR2T3Q8NH03 318 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 CPA5Q8WXQ8 436 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 C18orf8Q96DM3 657 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 MRGPRX3Q96LB0 322 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 HSPA12BQ96MM6 686 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 NPY6RQ99463 290 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 PRSS16Q9NQE7 514 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 FSCN3Q9NQT6 498 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 WSB2Q9NYS7 404 aaPredicted RBP22.52■■□□□ 1.2
LIME1-203ENST00000465591 EVLQ9UI08 416 aaPredicted RBP22.52■■□□□ 1.2
LIME1-203ENST00000465591 PCDH15Q96QU1 1955 aa22.52■■□□□ 1.2
LIME1-203ENST00000465591 LGALS16A8MUM7 142 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 F5H5T6 163 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 I6L893 689 aaPredicted RBP22.51■■□□□ 1.19
LIME1-203ENST00000465591 M0QYT0 321 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 ATP5BP06576 529 aaKnown RBP22.51■■□□□ 1.19
LIME1-203ENST00000465591 CD6P30203 668 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 MATKP42679 507 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 NUMBP49757 651 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 SNX16P57768 344 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 PITRM1Q5JRX3 1037 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 NAA35Q5VZE5 725 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 FBXL22Q6P050 247 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 ERICH1Q86X53 443 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 ZDHHC17Q8IUH5 632 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 APCDD1Q8J025 514 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 AOPEPQ8N6M6 819 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 ZNF557Q8N988 423 aaPredicted RBP22.51■■□□□ 1.19
LIME1-203ENST00000465591 PRCCQ92733 491 aaPredicted RBP22.51■■□□□ 1.19
LIME1-203ENST00000465591 RNF34Q969K3 372 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 IGSF8Q969P0 613 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 TOE1Q96GM8 510 aaKnown RBP22.51■■□□□ 1.19
LIME1-203ENST00000465591 ZNF419Q96HQ0 510 aaPredicted RBP22.51■■□□□ 1.19
LIME1-203ENST00000465591 PIGVQ9NUD9 493 aa22.51■■□□□ 1.19
LIME1-203ENST00000465591 NYNRINQ9P2P1 1898 aaKnown RBP22.51■■□□□ 1.19
LIME1-203ENST00000465591 C4orf47A7E2U8 309 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 H0Y626 953 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 CDX4O14627 284 aaPredicted RBP22.5■■□□□ 1.19
LIME1-203ENST00000465591 LSM8O95777 96 aaKnown RBP22.5■■□□□ 1.19
LIME1-203ENST00000465591 SLC2A3P11169 496 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 ATP1A3P13637 1013 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 ABCB4P21439 1286 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 SOX5P35711 763 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 FLT3P36888 993 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 FMO1Q01740 532 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 CENPCQ03188 943 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 PPM1JQ5JR12 505 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 FAM102AQ5T9C2 384 aaPredicted RBP22.5■■□□□ 1.19
LIME1-203ENST00000465591 IL31Q6EBC2 164 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 C14orf80Q86SX3 495 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 NT5C3BQ969T7 300 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.5■■□□□ 1.19
LIME1-203ENST00000465591 SLC12A6Q9UHW9 1150 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 HS3ST4Q9Y661 456 aa22.5■■□□□ 1.19
LIME1-203ENST00000465591 LRRC10BA6NIK2 292 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 GOLGA8SH3BPF8 625 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 NDUFS2O75306 463 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 PAGE1O75459 146 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 ADCY5O95622 1261 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 IGLV3-19P01714 112 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 TPM2P07951 284 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 C7P10643 843 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 SULT1E1P49888 294 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 AUHQ13825 339 aaKnown RBP22.49■■□□□ 1.19
LIME1-203ENST00000465591 PLEKHG6Q3KR16 790 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 CCAR2Q8N163 923 aaKnown RBP22.49■■□□□ 1.19
LIME1-203ENST00000465591 OR52K2Q8NGK3 314 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 TBCBQ99426 244 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 GPR174Q9BXC1 333 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 KIAA1522Q9P206 1035 aaPredicted RBP22.49■■□□□ 1.19
LIME1-203ENST00000465591 SNX10Q9Y5X0 201 aa22.49■■□□□ 1.19
LIME1-203ENST00000465591 KNL1Q8NG31 2342 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms