RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 DLL3Q9NYJ7 618 aa16.82■□□□□ 0.28
SSNA1-204ENST00000464553 CALCOCO1Q9P1Z2 691 aa16.82■□□□□ 0.28
SSNA1-204ENST00000464553 MYO15AQ9UKN7 3530 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 SYCE3A1L190 88 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 TEX33O43247 280 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 CLDN11O75508 207 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 CALB1P05937 261 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 EPHX1P07099 455 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 CD70P32970 193 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 MPLP40238 635 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 ST8SIA6P61647 398 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 FOXK2Q01167 660 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 DEUP1Q05D60 604 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 AUHQ13825 339 aaKnown RBP16.81■□□□□ 0.28
SSNA1-204ENST00000464553 NR1I3Q14994 352 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 FUT11Q495W5 492 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 FIGNQ5HY92 759 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 FBXL22Q6P050 247 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 PRR23CQ6ZRP0 262 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 CARNMT1Q8N4J0 409 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 OR2T3Q8NH03 318 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 NETO1Q8TDF5 533 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 IQCDQ96DY2 449 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 HAPLN3Q96S86 360 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 AGPAT1Q99943 283 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 PIGVQ9NUD9 493 aa16.81■□□□□ 0.28
SSNA1-204ENST00000464553 XPO7Q9UIA9 1087 aaKnown RBP16.81■□□□□ 0.28
SSNA1-204ENST00000464553 PAGE1O75459 146 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 SERPINC1P01008 464 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 IGLV3-19P01714 112 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 SULT1E1P49888 294 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 LIMK1P53667 647 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 SFSWAPQ12872 951 aaKnown RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 LMAN2Q12907 356 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 PTPRNQ16849 979 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 CLEC16AQ2KHT3 1053 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 FNDC3BQ53EP0 1204 aaKnown RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 LRRC31Q6UY01 552 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 ERMP1Q7Z2K6 904 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 IRF2BP2Q7Z5L9 587 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 RABEPKQ7Z6M1 372 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 TMPRSS6Q8IU80 811 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 CFAP52Q8N1V2 620 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 RLN3Q8WXF3 142 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 PRCCQ92733 491 aaPredicted RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 SIPA1Q96FS4 1042 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 VCPIP1Q96JH7 1222 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 PCED1AQ9H1Q7 454 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 AIPL1Q9NZN9 384 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 ADAM22Q9P0K1 906 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 USP36Q9P275 1121 aaKnown RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 MBD1Q9UIS9 605 aaPredicted RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 SCML1Q9UN30 329 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 INVSQ9Y283 1065 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 RAD54BQ9Y620 910 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 MYO18AQ92614 2054 aaKnown RBP16.8■□□□□ 0.28
SSNA1-204ENST00000464553 ZNF292O60281 2723 aa16.8■□□□□ 0.28
SSNA1-204ENST00000464553 SYNJ2BP-COX16A0A087WUM0 186 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 IGHV1OR15-9A0A0B4J2B8 117 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 TARSL2A2RTX5 802 aaKnown RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 KRT3P12035 628 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 BCKDHBP21953 392 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 PRKCHP24723 683 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 FLT3P36888 993 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 NNMTP40261 264 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 PTPN9P43378 593 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 CDH4P55283 916 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 ECT2LQ008S8 904 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 CREB5Q02930 508 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 PTP4A2Q12974 167 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 ZNF177Q13360 481 aaPredicted RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 PLEKHG6Q3KR16 790 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 PITRM1Q5JRX3 1037 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 OTUD1Q5VV17 481 aaPredicted RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 MMS22LQ6ZRQ5 1243 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 CYP2U1Q7Z449 544 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 C12orf50Q8NA57 414 aaPredicted RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 WFDC5Q8TCV5 224 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 SORCS1Q8WY21 1168 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 FOXJ1Q92949 421 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 MYEOVQ96EZ4 313 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 RPRD1AQ96P16 312 aaPredicted RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 PCDHB18PQ96TA0 734 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 TBCBQ99426 244 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 RTKNQ9BST9 563 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 MKRN2Q9H000 416 aaKnown RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 TKTL2Q9H0I9 626 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 CBX8Q9HC52 389 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 COX16Q9P0S2 106 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 INTS6Q9UL03 887 aaKnown RBP16.79■□□□□ 0.28
SSNA1-204ENST00000464553 TBC1D30Q9Y2I9 924 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 HS3ST4Q9Y661 456 aa16.79■□□□□ 0.28
SSNA1-204ENST00000464553 SIGLEC16A6NMB1 481 aa16.78■□□□□ 0.28
SSNA1-204ENST00000464553 DRGXA6NNA5 263 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms