RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 CSH1P0DML2 217 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 CSH2P0DML3 217 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 HOXD10P28358 340 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 ALDH3A1P30838 453 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 NIPAL4Q0D2K0 466 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 FAM182AQ5T1J6 154 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 STXBP5Q5T5C0 1151 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 TRMT10BQ6PF06 316 aaKnown RBP17.96■□□□□ 0.46
LMO2-204ENST00000464025 SLC24A5Q71RS6 500 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 OTOAQ7RTW8 1153 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 PID1Q7Z2X4 250 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 FITM2Q8N6M3 262 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 SLC43A3Q8NBI5 491 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 ACMSDQ8TDX5 336 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 DQX1Q8TE96 717 aaKnown RBP17.96■□□□□ 0.46
LMO2-204ENST00000464025 C10orf82Q8WW14 230 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 SPOCK2Q92563 424 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 RMDN2Q96LZ7 410 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 KLF6Q99612 283 aaPredicted RBP17.96■□□□□ 0.46
LMO2-204ENST00000464025 RHOBTB2Q9BYZ6 727 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 PLLPQ9Y342 182 aa17.96■□□□□ 0.46
LMO2-204ENST00000464025 TNFRSF10BO14763 440 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 LRIG2O94898 1065 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 OAZ2O95190 189 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 AP2A1O95782 977 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 COL6A1P12109 1028 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 CKBP12277 381 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 ELNP15502 786 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 HOXC13P31276 330 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 CRHR1P34998 444 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 GARSP41250 739 aaKnown RBP17.95■□□□□ 0.46
LMO2-204ENST00000464025 COG7P83436 770 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 YWHAHQ04917 246 aaPredicted RBP17.95■□□□□ 0.46
LMO2-204ENST00000464025 DBN1Q16643 649 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 FBXW10Q5XX13 1052 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 KCTD11Q693B1 232 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 ITPRIPL1Q6GPH6 555 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 GLB1LQ6UWU2 654 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 RTN4RL1Q86UN2 441 aaPredicted RBP17.95■□□□□ 0.46
LMO2-204ENST00000464025 TRIM42Q8IWZ5 723 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 NPWQ8N729 165 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 EDEM1Q92611 657 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 CDKL2Q92772 493 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 SRPK1Q96SB4 655 aaKnown RBP17.95■□□□□ 0.46
LMO2-204ENST00000464025 KANSL3Q9P2N6 904 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 INPP5FQ9Y2H2 1132 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 NR2E3Q9Y5X4 410 aa17.95■□□□□ 0.46
LMO2-204ENST00000464025 WDR27A2RRH5 827 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 HMX2A2RU54 273 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 C2CD2LO14523 706 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 IRAK2O43187 625 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 DCTN3O75935 186 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 ATP5HO75947 161 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 DNAJB2P25686 324 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 PAN2Q504Q3 1202 aaKnown RBP17.94■□□□□ 0.46
LMO2-204ENST00000464025 SPANXN3Q5MJ09 141 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 FYB2Q5VWT5 728 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 SPATA2LQ8IUW3 424 aaPredicted RBP17.94■□□□□ 0.46
LMO2-204ENST00000464025 GLT1D1Q96MS3 346 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 TSGA13Q96PP4 275 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 TMEM209Q96SK2 561 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 GBA3Q9H227 469 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 SMOC2Q9H3U7 446 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 CASS4Q9NQ75 786 aa17.94■□□□□ 0.46
LMO2-204ENST00000464025 KLHL8Q9P2G9 620 aaPredicted RBP17.94■□□□□ 0.46
LMO2-204ENST00000464025 PLXNA3P51805 1871 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 AP3B1O00203 1094 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 PSMD3O43242 534 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 CACNG3O60359 315 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 ITGB1P05556 798 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 CCNB1P14635 433 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 MGAT1P26572 445 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 HNRNPH1P31943 449 aaKnown RBP17.93■□□□□ 0.46
LMO2-204ENST00000464025 NCALDP61601 193 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 SF3A3Q12874 501 aaKnown RBP eCLIP17.93■□□□□ 0.46
LMO2-204ENST00000464025 CRYMQ14894 314 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 TEX44Q53QW1 395 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 FAM133BQ5BKY9 247 aaKnown RBP17.93■□□□□ 0.46
LMO2-204ENST00000464025 CTU1Q7Z7A3 348 aaKnown RBP17.93■□□□□ 0.46
LMO2-204ENST00000464025 TP53INP2Q8IXH6 220 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 LZTR1Q8N653 840 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 ANKLE1Q8NAG6 615 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 ZSCAN18Q8TBC5 510 aaPredicted RBP17.93■□□□□ 0.46
LMO2-204ENST00000464025 RAB3IL1Q8TBN0 382 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 PXYLP1Q8TE99 480 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 DEPDC1BQ8WUY9 529 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 FUBP3Q96I24 572 aaKnown RBP eCLIP17.93■□□□□ 0.46
LMO2-204ENST00000464025 FAM111AQ96PZ2 611 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 GORASP1Q9BQQ3 440 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 IQCGQ9H095 443 aaKnown RBP17.93■□□□□ 0.46
LMO2-204ENST00000464025 ZCWPW1Q9H0M4 648 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 KLC4Q9NSK0 619 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 SEPT10Q9P0V9 454 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 SHROOM3Q8TF72 1996 aa17.93■□□□□ 0.46
LMO2-204ENST00000464025 FNDC1Q4ZHG4 1894 aaPredicted RBP17.92■□□□□ 0.46
LMO2-204ENST00000464025 MAGEB16A2A368 324 aa17.92■□□□□ 0.46
LMO2-204ENST00000464025 UGT1A9O60656 530 aa17.92■□□□□ 0.46
LMO2-204ENST00000464025 TROVE2P10155 538 aaKnown RBP eCLIP17.92■□□□□ 0.46
LMO2-204ENST00000464025 EPHB2P29323 1055 aa17.92■□□□□ 0.46
LMO2-204ENST00000464025 SERPINB4P48594 390 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms