RNA–Protein interactions for RNA: ENST00000463217.2

RPL3P9-201, Transcript of ribosomal protein L3 pseudogene 9, humanhuman

BASIC

Gene RPL3P9, Length 1,183 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P9-201ENST00000463217 FRMD1Q8N878 549 aa13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 CADM4Q8NFZ8 388 aa13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 EPS8L1Q8TE68 723 aa13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 SORCS1Q8WY21 1168 aa13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 RNF34Q969K3 372 aa13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 NUSAP1Q9BXS6 441 aaKnown RBP13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 STIM2Q9P246 746 aa13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 CYP8B1Q9UNU6 501 aa13.17□□□□□ -0.3
RPL3P9-201ENST00000463217 DNAH14Q0VDD8 3507 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 A0A1B0GVM2 712 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 LNP1A1A4G5 178 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 TCAF2A6NFQ2 919 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 LGALS16A8MUM7 142 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 H0Y626 953 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 TM4SF5O14894 197 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 ZNF18P17022 549 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 CDK11BP21127 795 aaKnown RBP13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 CD70P32970 193 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SOX5P35711 763 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 COPB1P53618 953 aaKnown RBP13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 COPAP53621 1224 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 JAM2P57087 298 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SULT2A1Q06520 285 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 TRIM61Q5EBN2 209 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 DAB2IPQ5VWQ8 1189 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 RAP1GAP2Q684P5 730 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SND1Q7KZF4 910 aaKnown RBP eCLIP13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 CARNMT1Q8N4J0 409 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 WFDC5Q8TCV5 224 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 NT5C3BQ969T7 300 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 NPY6RQ99463 290 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 BPIFA3Q9BQP9 254 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 NUP58Q9BVL2 599 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SMOC1Q9H4F8 434 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 TMEM9BQ9NQ34 198 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 WSB2Q9NYS7 404 aaPredicted RBP13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SCML1Q9UN30 329 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SLC6A14Q9UN76 642 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 SIK3Q9Y2K2 1263 aa13.16□□□□□ -0.3
RPL3P9-201ENST00000463217 LAMA1P25391 3075 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 DCDC2BA2VCK2 349 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 M0QYT0 321 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 SERPINF2P08697 491 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 GNSP15586 552 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 CSKP41240 450 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 STAT1P42224 750 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 CXCR3P49682 368 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 TPMTP51580 245 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 PLK1P53350 603 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 NOMO3P69849 1222 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 PITX1P78337 314 aaPredicted RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 CDR2Q01850 454 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 PLEKHG6Q3KR16 790 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 SLC25A52Q3SY17 297 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 TTC31Q49AM3 519 aaPredicted RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 PITRM1Q5JRX3 1037 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 TCEAL6Q6IPX3 200 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 XYLT1Q86Y38 959 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 CYB5D2Q8WUJ1 264 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 TCEAL3Q969E4 200 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 TOE1Q96GM8 510 aaKnown RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 ERGIC2Q96RQ1 377 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 RXFP3Q9NSD7 469 aa13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 XPO7Q9UIA9 1087 aaKnown RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 NOCTQ9UK39 431 aaKnown RBP13.15□□□□□ -0.3
RPL3P9-201ENST00000463217 ITIH6Q6UXX5 1313 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 MED19A0JLT2 244 aaPredicted RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 TARSL2A2RTX5 802 aaKnown RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 RNASEH1O60930 286 aaKnown RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 CLDN11O75508 207 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 GRAP2O75791 330 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 SYPP08247 313 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 CCDC172P0C7W6 258 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 HLA-EP13747 358 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 ITPKAP23677 461 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 PI4KAP42356 2102 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 ECT2LQ008S8 904 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 TYRO3Q06418 890 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 NME3Q13232 169 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 AUHQ13825 339 aaKnown RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 NCAPHQ15003 741 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 SYCP1Q15431 976 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 HNRNPA1L2Q32P51 320 aaKnown RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 PPM1JQ5JR12 505 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 FAM102AQ5T9C2 384 aaPredicted RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 TAF3Q5VWG9 929 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 RNF219Q5W0B1 726 aaPredicted RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 ARMCX6Q7L4S7 300 aa13.14□□□□□ -0.31
RPL3P9-201ENST00000463217 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms