RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 ALDOAP04075 364 aaKnown RBP6.21□□□□□ -1.42
COPS3-205ENST00000463097 RARGP13631 454 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 CPA2P48052 419 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 CTCFP49711 727 aaPredicted RBP6.21□□□□□ -1.42
COPS3-205ENST00000463097 EIF3BP55884 814 aaKnown RBP6.21□□□□□ -1.42
COPS3-205ENST00000463097 LINC00310P59036 64 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 ARHGAP8P85298 464 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 LRMPQ12912 555 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 ALKBH1Q13686 389 aaKnown RBP6.21□□□□□ -1.42
COPS3-205ENST00000463097 SH2D4BQ5SQS7 431 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 TREML2Q5T2D2 321 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 Q6ZRM9 215 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 VSIG1Q86XK7 387 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 FRMD1Q8N878 549 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 B3GALNT2Q8NCR0 500 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 XAGE5Q8WWM1 108 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 JAKMIP2Q96AA8 810 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 CNDP2Q96KP4 475 aaKnown RBP6.21□□□□□ -1.42
COPS3-205ENST00000463097 ELOVL1Q9BW60 279 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 ALOXE3Q9BYJ1 711 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 SMARCAD1Q9H4L7 1026 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 SLC22A11Q9NSA0 550 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 EHD2Q9NZN4 543 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 KLQ9UEF7 1012 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 MAP3K2Q9Y2U5 619 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 XDHP47989 1333 aa6.21□□□□□ -1.42
COPS3-205ENST00000463097 NPIPB13A6NJU9 1138 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 NPIPB5A8MRT5 1133 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 AHRRA9YTQ3 701 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 MYO1GB0I1T2 1018 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 NPIPB4C9JG80 1138 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 FESP07332 822 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 C1QTNF9P0C862 333 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 TMIGD3P0DMS9 266 aaPredicted RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 PPARGP37231 505 aaPredicted RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 EIF2DP41214 584 aaKnown RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 DPP6P42658 865 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 SCNN1GP51170 649 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 SUMO2P61956 95 aaKnown RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 TMEM115Q12893 351 aaPredicted RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 PUM1Q14671 1186 aaKnown RBP eCLIP6.2□□□□□ -1.42
COPS3-205ENST00000463097 GPR162Q16538 588 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 PLEKHS1Q5SXH7 462 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 HECTD3Q5T447 861 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 ZKSCAN2Q63HK3 967 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 NCEH1Q6PIU2 408 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 DPY19L3Q6ZPD9 716 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 TEX11Q8IYF3 940 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 PNPLA1Q8N8W4 532 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 BEND2Q8NDZ0 799 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 CNOT9Q92600 299 aaKnown RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 ATP6V1E2Q96A05 226 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 FAM84AQ96KN4 292 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 EPHX3Q9H6B9 360 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 TTC12Q9H892 705 aaPredicted RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 MGAT4CQ9UBM8 478 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 ZNF70Q9UC06 446 aaPredicted RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 CHORDC1Q9UHD1 332 aaPredicted RBP6.2□□□□□ -1.42
COPS3-205ENST00000463097 SLCO3A1Q9UIG8 710 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 VPS4AQ9UN37 437 aa6.2□□□□□ -1.42
COPS3-205ENST00000463097 TEX13CA0A0J9YWL9 993 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 MARCH11A6NNE9 402 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 C16orf96A6NNT2 1141 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 SH2B2O14492 632 aaPredicted RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 PER2O15055 1255 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 CYP27B1O15528 508 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 FOXS1O43638 330 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 EIF2S1P05198 315 aaKnown RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 IGFBP2P18065 325 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 MATN1P21941 496 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 PRPH2P23942 346 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 GCH1P30793 250 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 UBA7P41226 1012 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 GARSP41250 739 aaKnown RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 CLCN2P51788 898 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 RPS6KA3P51812 740 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 KRT83P78385 493 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 TXNL4AP83876 142 aaKnown RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 ITIH3Q06033 890 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 CRYMQ14894 314 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 CYP1B1Q16678 543 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 TEDDM1Q5T9Z0 273 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 CDC73Q6P1J9 531 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 TMEM88Q6PEY1 159 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 RRM2BQ7LG56 351 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 PLD5Q8N7P1 536 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 ENDOVQ8N8Q3 282 aaKnown RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 RAB40AQ8WXH6 277 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 NCSTNQ92542 709 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 ARHGEF2Q92974 986 aaKnown RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 KLHL29Q96CT2 875 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 PRR25Q96S07 402 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 HTATIP2Q9BUP3 242 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 CINPQ9BW66 212 aaPredicted RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 NPLQ9BXD5 320 aaPredicted RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 MAK16Q9BXY0 300 aaKnown RBP6.19□□□□□ -1.42
COPS3-205ENST00000463097 SIL1Q9H173 461 aa6.19□□□□□ -1.42
COPS3-205ENST00000463097 PDE7BQ9NP56 450 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms