RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 UBE2TQ9NPD8 197 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 ACP6Q9NPH0 428 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 TM7SF3Q9NS93 570 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 ELOVL2Q9NXB9 296 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 TAB2Q9NYJ8 693 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 APEX2Q9UBZ4 518 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 EIF2B4Q9UI10 523 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 BTBD3Q9Y2F9 522 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZNF510Q9Y2H8 683 aa8.26□□□□□ -1.09
CDC42BPA-210ENST00000462553 TDRD6O60522 2096 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 A0A1B0GVT2 93 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 CER1O95813 267 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ATXN1LP0C7T5 689 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PNMA6AP0CW24 399 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 SETSIPP0DME0 302 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 EEF1GP26641 437 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 HLA-FP30511 346 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 OXTRP30559 389 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ACSL1P33121 698 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 RDXP35241 583 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 CHKAP35790 457 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 MATKP42679 507 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 SGSHP51688 502 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 YWHAGP61981 247 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 COG7P83436 770 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 MYL5Q02045 173 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 CAMK2GQ13555 558 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 TRIP4Q15650 581 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 CNGA2Q16280 664 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PTPRNQ16849 979 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ARHGAP44Q17R89 818 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 KLHL40Q2TBA0 621 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 COL28A1Q2UY09 1125 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 HLA-BQ31612 363 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 SASS6Q6UVJ0 657 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 LAYNQ6UX15 382 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ENOSF1Q7L5Y1 443 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 TMPRSS7Q7RTY8 843 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PDZD3Q86UT5 571 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 MARCH9Q86YJ5 346 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 CREBRFQ8IUR6 639 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZNF366Q8N895 744 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 UBA3Q8TBC4 463 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 WFDC5Q8TCV5 224 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 SLC35F5Q8WV83 523 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 NDRG1Q92597 394 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PRCCQ92733 491 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PLD4Q96BZ4 506 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 BBC3Q96PG8 261 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 CDK5RAP1Q96SZ6 601 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ORAI3Q9BRQ5 295 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 NAA15Q9BXJ9 866 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ULBP1Q9BZM6 244 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 DCLK3Q9C098 648 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 GANQ9H2C0 597 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 TMEM245Q9H330 911 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 CCDC86Q9H6F5 360 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 FANCLQ9NW38 375 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 MARCH2Q9P0N8 246 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 KIAA1522Q9P206 1035 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 KIAA1257Q9ULG3 409 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 APOBEC2Q9Y235 224 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 RAXQ9Y2V3 346 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PCDHB9Q9Y5E1 797 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PCDHGB2Q9Y5G2 931 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 PCDHGA4Q9Y5G9 962 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 FHOD1Q9Y613 1164 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 BOD1L1Q8NFC6 3051 aa8.25□□□□□ -1.09
CDC42BPA-210ENST00000462553 DOCK4Q8N1I0 1966 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 SLC12A8A0AV02 714 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 C10orf142B7Z368 130 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 M0QYV0 167 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 FLRT2O43155 660 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 SYNCRIPO60506 623 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 EPHX1P07099 455 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 KRT5P13647 590 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 RPL34P49207 117 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 CSNK1EP49674 416 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 RGS7P49802 495 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 KLK7P49862 253 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 ADIGQ0VDE8 80 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 CAMK2BQ13554 666 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 STILQ15468 1287 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 MEA1Q16626 185 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 KIF19Q2TAC6 998 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 ANO6Q4KMQ2 910 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 KCNT1Q5JUK3 1230 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 PM20D1Q6GTS8 502 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 PMF1Q6P1K2 205 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 DENND1BQ6P3S1 775 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 IL27RAQ6UWB1 636 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 SERPINA13PQ6UXR4 307 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 KIAA0907Q7Z7F0 614 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 ADIPOR2Q86V24 386 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 FAM124AQ86V42 546 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 DHX40Q8IX18 779 aaKnown RBP8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 AOPEPQ8N6M6 819 aa8.24□□□□□ -1.09
CDC42BPA-210ENST00000462553 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms