RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 DCLK1O15075 740 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 TRIM24O15164 1050 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 GREM1O60565 184 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 ADAM23O75077 832 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 CISD3P0C7P0 127 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 ZNF806P0C7X5 589 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 KRT3P12035 628 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 PDGFRAP16234 1089 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 GABRG2P18507 467 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 NDUFV2P19404 249 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 P2RY2P41231 377 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 CDH4P55283 916 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 ECT2LQ008S8 904 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 KCNMA1Q12791 1236 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 TEAD4Q15561 434 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 CDO1Q16878 200 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 DUOXA1Q1HG43 343 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 PTPN20Q4JDL3 420 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 TDRD12Q587J7 1177 aaKnown RBP9.24□□□□□ -0.93
DDX39B-216ENST00000462421 PITRM1Q5JRX3 1037 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 FAM46CQ5VWP2 391 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 MMS22LQ6ZRQ5 1243 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 TMPRSS6Q8IU80 811 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 SYT12Q8IV01 421 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 TMEFF1Q8IYR6 380 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 CFAP52Q8N1V2 620 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 CYB5D2Q8WUJ1 264 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 RLN3Q8WXF3 142 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 EZH1Q92800 747 aaPredicted RBP9.24□□□□□ -0.93
DDX39B-216ENST00000462421 PIWIL1Q96J94 861 aaKnown RBP9.24□□□□□ -0.93
DDX39B-216ENST00000462421 ERGIC2Q96RQ1 377 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 OMDQ99983 421 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 C11orf70Q9BRQ4 267 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 EDEM2Q9BV94 578 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 GANQ9H2C0 597 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 POLR3BQ9NW08 1133 aaPredicted RBP9.24□□□□□ -0.93
DDX39B-216ENST00000462421 ZNHIT6Q9NWK9 470 aaKnown RBP9.24□□□□□ -0.93
DDX39B-216ENST00000462421 C2orf42Q9NWW7 574 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 FBXO10Q9UK96 956 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 VANGL2Q9ULK5 521 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 GREB1Q4ZG55 1949 aa9.24□□□□□ -0.93
DDX39B-216ENST00000462421 KIF26AQ9ULI4 1882 aaPredicted RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 CACNA1HO95180 2353 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 DENND4CQ5VZ89 1909 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 LRRC72A6NJI9 287 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SRGAP2O75044 1071 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 GPD1P21695 349 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 HLA-FP30511 346 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SLC6A4P31645 630 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 CDH5P33151 784 aaPredicted RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 CSKP41240 450 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 IL12RB1P42701 662 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 GABRB2P47870 512 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 KLK7P49862 253 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 UBASH3AP57075 661 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 GEMIN4P57678 1058 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 RPS24P62847 133 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 NOMO3P69849 1222 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 ATP11AP98196 1134 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 ZNF33AQ06730 810 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 KLHL30Q0D2K2 578 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 AUHQ13825 339 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 FUT11Q495W5 492 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SLC45A4Q5BKX6 768 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 FAM133BQ5BKY9 247 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 TRIM61Q5EBN2 209 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 EFHC2Q5JST6 749 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 RETSATQ6NUM9 610 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 RWDD4Q6NW29 188 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 FAM124AQ86V42 546 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 XYLT1Q86Y38 959 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SFTPA1Q8IWL2 248 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 CCAR2Q8N163 923 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 PAF1Q8N7H5 531 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 KDM1BQ8NB78 822 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SORCS1Q8WY21 1168 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SLC39A13Q96H72 371 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 MRGPRX1Q96LB2 322 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 HSPA12BQ96MM6 686 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 AGPAT1Q99943 283 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 NCAPGQ9BPX3 1015 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 GTPBP2Q9BX10 602 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 NAA15Q9BXJ9 866 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 BTBD1Q9H0C5 482 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 MIR1-1HGQ9H1L0 117 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 DUSP15Q9H1R2 295 aaPredicted RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 DEF6Q9H4E7 631 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SLC32A1Q9H598 525 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 TMEM9BQ9NQ34 198 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 CYTH4Q9UIA0 394 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 AJAP1Q9UKB5 411 aaPredicted RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 BZW2Q9Y6E2 419 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.23□□□□□ -0.93
DDX39B-216ENST00000462421 SCINQ9Y6U3 715 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 ANAPC1Q9H1A4 1944 aa9.23□□□□□ -0.93
DDX39B-216ENST00000462421 ZFHX2Q9C0A1 2572 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms