RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CEP85Q6P2H3 762 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 ZNF585AQ6P3V2 769 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 ZNF783Q6ZMS7 281 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 SUGP1Q8IWZ8 645 aaKnown RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 SAMD3Q8N6K7 520 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 DBF4BQ8NFT6 615 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 SCFD2Q8WU76 684 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 SUSD6Q92537 303 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 NMD3Q96D46 503 aaKnown RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 KLHL32Q96NJ5 620 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 MOGAT1Q96PD6 335 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 STRBPQ96SI9 672 aaKnown RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 CNPPD1Q9BV87 410 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 UNKQ9C0B0 810 aaKnown RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 RANBP17Q9H2T7 1088 aaKnown RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 PAG1Q9NWQ8 432 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 HDAC6Q9UBN7 1215 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 ADD3Q9UEY8 706 aaKnown RBP5.49□□□□□ -1.53
COPS3-204ENST00000462236 CD207Q9UJ71 328 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 SLC4A4Q9Y6R1 1079 aa5.49□□□□□ -1.53
COPS3-204ENST00000462236 EMSYQ7Z589 1322 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 RAD50Q92878 1312 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 IGF2RP11717 2491 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 A0A1B0GTW7 788 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 E7ENX8 843 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 C1QTNF3-AMACRE9PGA6 284 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 RNASET2O00584 256 aaKnown RBP5.48□□□□□ -1.53
COPS3-204ENST00000462236 PMM2O15305 246 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 IPO8O15397 1037 aaKnown RBP5.48□□□□□ -1.53
COPS3-204ENST00000462236 LINC01565O15544 149 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 GLP2RO95838 553 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 MMP1P03956 469 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 KITP10721 976 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 ZNF20P17024 532 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 HDCP19113 662 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 ICAM3P32942 547 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 BMPR1AP36894 532 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 RRP1P56182 461 aaKnown RBP5.48□□□□□ -1.53
COPS3-204ENST00000462236 RNASE9P60153 205 aaKnown RBP5.48□□□□□ -1.53
COPS3-204ENST00000462236 ADAM17P78536 824 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 TAP2Q03519 686 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 SLC44A4Q53GD3 710 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 NOMO2Q5JPE7 1267 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 TSHZ3Q63HK5 1081 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 FOXR2Q6PJQ5 311 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 RASGRP2Q7LDG7 609 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 USP37Q86T82 979 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 ERC1Q8IUD2 1116 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 MYOCDQ8IZQ8 938 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 TMIEQ8NEW7 156 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 OR56A1Q8NGH5 318 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 AFG1LQ8WV93 481 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 ATOH1Q92858 354 aaPredicted RBP5.48□□□□□ -1.53
COPS3-204ENST00000462236 ZNF689Q96CS4 500 aaPredicted RBP5.48□□□□□ -1.53
COPS3-204ENST00000462236 PGBD4Q96DM1 585 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 ZNF518BQ9C0D4 1074 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 TINAGL1Q9GZM7 467 aaPredicted RBP5.48□□□□□ -1.53
COPS3-204ENST00000462236 ZNF287Q9HBT7 754 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 SLAMF7Q9NQ25 335 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 SORCS3Q9UPU3 1222 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 EXOC6BQ9Y2D4 811 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.48□□□□□ -1.53
COPS3-204ENST00000462236 ASPMQ8IZT6 3477 aa5.48□□□□□ -1.53
COPS3-204ENST00000462236 MYH15Q9Y2K3 1946 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 MED19A0JLT2 244 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 ZNF785A8K8V0 405 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 TBC1D4O60343 1298 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 ABHD16AO95870 558 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 PDGFBP01127 241 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 CFIP05156 583 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 TXNP10599 105 aaKnown RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 XRCC6P12956 609 aaKnown RBP eCLIP5.47□□□□□ -1.53
COPS3-204ENST00000462236 ATF7P17544 494 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 MCCP23508 829 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 SLC1A4P43007 532 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 ZNF135P52742 658 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 AK2P54819 239 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 WNT3P56703 355 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 SNAP25P60880 206 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 PSMC1P62191 440 aaKnown RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 RPS6P62753 249 aaKnown RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 FMO1Q01740 532 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 RAB32Q13637 225 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 KCNC3Q14003 757 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 FAM160B1Q5W0V3 765 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 LMBRD2Q68DH5 695 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 SLC30A10Q6XR72 485 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 PPP1R32Q7Z5V6 425 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 SERINC5Q86VE9 423 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 P2RX5Q93086 422 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 BOD1Q96IK1 185 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 RIPOR3Q96MK2 946 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 NEU1Q99519 415 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 SMOQ99835 787 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 COLEC11Q9BWP8 271 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 PHF7Q9BWX1 381 aaPredicted RBP5.47□□□□□ -1.53
COPS3-204ENST00000462236 IMPG2Q9BZV3 1241 aa5.47□□□□□ -1.53
COPS3-204ENST00000462236 MAF1Q9H063 256 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms