RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 BTN2A3PQ96KV6 586 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 UQCC2Q9BRT2 126 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 WDR83Q9BRX9 315 aaKnown RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 ADAMTS10Q9H324 1103 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 PDZD7Q9H5P4 517 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 POLR1BQ9H9Y6 1135 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 IFT122Q9HBG6 1241 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 MOCS1Q9NZB8 636 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 MAD2L2Q9UI95 211 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 ATPIF1Q9UII2 106 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 SERPINB13Q9UIV8 391 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 NOCTQ9UK39 431 aaKnown RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 SNCAIPQ9Y6H5 919 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 ARFGEF1Q9Y6D6 1849 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 FAM170AA1A519 330 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 SMCO2A6NFE2 343 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 TNPO2O14787 897 aaKnown RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 BET1O15155 118 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 PSTPIP1O43586 416 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 DDHD2O94830 711 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 ARHGEF15O94989 841 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 EGFRP00533 1210 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 C7P10643 843 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 KITP10721 976 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 RALAP11233 206 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 NELFEP18615 380 aaKnown RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 CFL1P23528 166 aaKnown RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 CASP4P49662 377 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 IDH3AP50213 366 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 DSTNP60981 165 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 COPZ1P61923 177 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 TRIM28Q13263 835 aaKnown RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 RFTN1Q14699 578 aaPredicted RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 COG2Q14746 738 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 UBE2SQ16763 222 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 STXBP5Q5T5C0 1151 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 UNC5AQ6ZN44 842 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 EFCAB3Q8N7B9 438 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 LMO3Q8TAP4 145 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 ZC3H15Q8WU90 426 aaKnown RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 VPS33AQ96AX1 596 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 CFAP36Q96G28 342 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 NGLY1Q96IV0 654 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 MECRQ9BV79 373 aa9.43□□□□□ -0.9
LINC01140-201ENST00000461990 MARCOQ9UEW3 520 aaPredicted RBP9.43□□□□□ -0.9
LINC01140-201ENST00000461990 ZNF195O14628 629 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MTSS1O43312 755 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 SNX2O60749 519 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MYCP01106 439 aaPredicted RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MATN1P21941 496 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 PSMD8P48556 350 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MLLT6P55198 1093 aaPredicted RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 KCNQ4P56696 695 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MS4A2Q01362 244 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 DNASE1L3Q13609 305 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 ANGEL2Q5VTE6 544 aaKnown RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 AGAP9Q5VTM2 703 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 UBE2UQ5VVX9 321 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 GTF2IRD2BQ6EKJ0 949 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 ZCCHC8Q6NZY4 707 aaKnown RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 FAM171BQ6P995 826 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 KCTD8Q6ZWB6 473 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 GSTA5Q7RTV2 222 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MAVSQ7Z434 540 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 HEATR3Q7Z4Q2 680 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 KCTD20Q7Z5Y7 419 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 GTF2IRD2Q86UP8 949 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 GPBP1Q86WP2 473 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 KATNAL2Q8IYT4 538 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 CLYBLQ8N0X4 340 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 BEND7Q8N7W2 519 aaPredicted RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 DCPSQ96C86 337 aaKnown RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MKRN2Q9H000 416 aaKnown RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 ZNF395Q9H8N7 513 aaPredicted RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 C6orf50Q9HD87 102 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 CFL2Q9Y281 166 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 SLC27A5Q9Y2P5 690 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 SMIM22K7EJ46 135 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 SLC22A2O15244 555 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 PLA2G4BP0C869 781 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 KRT10P13645 584 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 PSMC2P35998 433 aaKnown RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 ARSEP51690 589 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 NME5P56597 212 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 NLRP11P59045 1033 aaKnown RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 TTC39BQ5VTQ0 682 aaPredicted RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 TNS3Q68CZ2 1445 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 OTOP3Q7RTS5 596 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 PGAM4Q8N0Y7 254 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 ZNF786Q8N393 782 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 CMASQ8NFW8 434 aaPredicted RBP9.42□□□□□ -0.9
LINC01140-201ENST00000461990 MAP6Q96JE9 813 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 CNDP1Q96KN2 507 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 PCDH9Q9HC56 1237 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 PNPLA8Q9NP80 782 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 CD320Q9NPF0 282 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 IL17RBQ9NRM6 502 aa9.42□□□□□ -0.9
LINC01140-201ENST00000461990 TSPY2A6NKD2 308 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms