RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 DDX50Q9BQ39 737 aaKnown RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 NUSAP1Q9BXS6 441 aaKnown RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 DEF6Q9H4E7 631 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 SEPT11Q9NVA2 429 aaKnown RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 ELOVL2Q9NXB9 296 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 THAP10Q9P2Z0 257 aaPredicted RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 ADAMTS1Q9UHI8 967 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 CYTH4Q9UIA0 394 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 MBD1Q9UIS9 605 aaPredicted RBP14.34□□□□□ -0.11
RBM39-222ENST00000461849 STOML2Q9UJZ1 356 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 NENFQ9UMX5 172 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 CYP8B1Q9UNU6 501 aa14.34□□□□□ -0.11
RBM39-222ENST00000461849 A0A087X0T9 212 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 AKR1B10O60218 316 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 LCA5LO95447 670 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 FAM228BP0C875 321 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 MMP8P22894 467 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 HOXD9P28356 352 aaPredicted RBP14.33□□□□□ -0.12
RBM39-222ENST00000461849 IL12RB1P42701 662 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 PTGER3P43115 390 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 NSFP46459 744 aaKnown RBP14.33□□□□□ -0.12
RBM39-222ENST00000461849 GABRB2P47870 512 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 RING1Q06587 406 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 LMAN2Q12907 356 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 TRIM61Q5EBN2 209 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 DAB2IPQ5VWQ8 1189 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 ACAD10Q6JQN1 1059 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 SERPINA13PQ6UXR4 307 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 SYT12Q8IV01 421 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 CCDC117Q8IWD4 279 aaPredicted RBP14.33□□□□□ -0.12
RBM39-222ENST00000461849 LRRC8AQ8IWT6 810 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 ZNF557Q8N988 423 aaPredicted RBP14.33□□□□□ -0.12
RBM39-222ENST00000461849 P2RY11Q96G91 374 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 VCPIP1Q96JH7 1222 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 PPP1R13BQ96KQ4 1090 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 MRGPRX1Q96LB2 322 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.33□□□□□ -0.122e-6■□□□□ 8.8
RBM39-222ENST00000461849 CLEC4EQ9ULY5 219 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 PLA2G4CQ9UP65 541 aa14.33□□□□□ -0.12
RBM39-222ENST00000461849 NUP205Q92621 2012 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 IGHV1OR15-9A0A0B4J2B8 117 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 LNP1A1A4G5 178 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 C4orf47A7E2U8 309 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 PATE3B3GLJ2 98 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 IRAK2O43187 625 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 NRDCO43847 1150 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 ACSL4O60488 711 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 TBL1XO60907 577 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 RTN2O75298 545 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 GABBR2O75899 941 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 CALB1P05937 261 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 EPHX1P07099 455 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 ACADMP11310 421 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 CYLC1P35663 651 aaPredicted RBP14.32□□□□□ -0.12
RBM39-222ENST00000461849 SCNN1AP37088 669 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 GSCP56915 257 aaPredicted RBP14.32□□□□□ -0.12
RBM39-222ENST00000461849 ZNF33AQ06730 810 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
RBM39-222ENST00000461849 ZNF234Q14588 700 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 PTPN20Q4JDL3 420 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 ERICH1Q86X53 443 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 ZDHHC17Q8IUH5 632 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 AHI1Q8N157 1196 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 DEFB119Q8N690 84 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 CEP76Q8TAP6 659 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 DQX1Q8TE96 717 aaKnown RBP14.32□□□□□ -0.12
RBM39-222ENST00000461849 WFIKKN2Q8TEU8 576 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 AZIN2Q96A70 460 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 TRIM11Q96F44 468 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 CPXM1Q96SM3 734 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 IRX2Q9BZI1 471 aaPredicted RBP14.32□□□□□ -0.12
RBM39-222ENST00000461849 ISCUQ9H1K1 167 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 POPDC2Q9HBU9 364 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 TMEM9BQ9NQ34 198 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 NAALADL1Q9UQQ1 740 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 TLR6Q9Y2C9 796 aa14.32□□□□□ -0.12
RBM39-222ENST00000461849 ATXN2Q99700 1313 aaKnown RBP14.32□□□□□ -0.12
RBM39-222ENST00000461849 E5RJQ4 531 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 IGLV3-27P01718 113 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 APOEP02649 317 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 PTMAP06454 111 aaKnown RBP14.31□□□□□ -0.12
RBM39-222ENST00000461849 ATP5BP06576 529 aaKnown RBP14.31□□□□□ -0.12
RBM39-222ENST00000461849 ITPKAP23677 461 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 HLA-FP30511 346 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 ATXN3P54252 364 aaPredicted RBP14.31□□□□□ -0.12
RBM39-222ENST00000461849 IRX4P78413 519 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 PTP4A2Q12974 167 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 NNTQ13423 1086 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 FUT11Q495W5 492 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 FNDC3BQ53EP0 1204 aaKnown RBP14.31□□□□□ -0.12
RBM39-222ENST00000461849 MPP7Q5T2T1 576 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 SYCP2LQ5T4T6 812 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 PIK3R6Q5UE93 754 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 ALKBH5Q6P6C2 394 aaKnown RBP14.31□□□□□ -0.12
RBM39-222ENST00000461849 RFWD3Q6PCD5 774 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 CHST9Q7L1S5 443 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 MON1BQ7L1V2 547 aa14.31□□□□□ -0.12
RBM39-222ENST00000461849 RABEPKQ7Z6M1 372 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms