RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CD180Q99467 661 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 AGAP2Q99490 1192 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 TIMP4Q99727 224 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 SFXN1Q9H9B4 322 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 PLEKHA2Q9HB19 425 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 PREBQ9HCU5 417 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 PPP1R14DQ9NXH3 145 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 SEMA5BQ9P283 1151 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 RAB21Q9UL25 225 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 ARHGAP26Q9UNA1 814 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 SLC12A4Q9UP95 1085 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 PCDHB2Q9Y5E7 798 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 SCINQ9Y6U3 715 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 SPATA31A5Q5VU36 1347 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 SPATA31A6Q5VVP1 1343 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 SPATA31A7Q8IWB4 1347 aa3.37□□□□□ -1.87
HDAC6-212ENST00000461608 GAGE10A6NGK3 116 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 M0QYT0 321 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 PRAMEF2O60811 474 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 TULP3O75386 442 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 JTBO76095 146 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 NUDT3O95989 172 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 HNRNPA1P09651 372 aaKnown RBP eCLIP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 WEE2P0C1S8 567 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 APEHP13798 732 aaKnown RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ITGB6P18564 788 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 TNFAIP3P21580 790 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 NDUFS1P28331 727 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 MPLP40238 635 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 RPS6KA3P51812 740 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 CLNS1AP54105 237 aaKnown RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 FOXL2P58012 376 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 PSG6Q00889 435 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 COL10A1Q03692 680 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ZNF169Q14929 603 aaPredicted RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 MFSD13AQ14CX5 517 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 CERKLQ49MI3 558 aaPredicted RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 GXYLT1Q4G148 440 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 RNASE12Q5GAN4 147 aaKnown RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 HECTD2Q5U5R9 776 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 TMEM65Q6PI78 240 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 C1orf122Q6ZSJ8 110 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 GALNT7Q86SF2 657 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 HEATR4Q86WZ0 1026 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ARMC8Q8IUR7 673 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ULK2Q8IYT8 1036 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 MAFAQ8NHW3 353 aaPredicted RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ZCCHC10Q8TBK6 192 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ADAMTS15Q8TE58 950 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 NCSTNQ92542 709 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 RBM17Q96I25 401 aaKnown RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 UROC1Q96N76 676 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 FUZQ9BT04 418 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 AGXT2Q9BYV1 514 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 CIPCQ9C0C6 399 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ALG13Q9NP73 1137 aaKnown RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 IRAK4Q9NWZ3 460 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 TERF2IPQ9NYB0 399 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 FOXJ2Q9P0K8 574 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 CNOT7Q9UIV1 285 aaKnown RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 CD207Q9UJ71 328 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 ASAP1Q9ULH1 1129 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 OSGIN2Q9Y236 505 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 PCDHA10Q9Y5I2 948 aa3.36□□□□□ -1.87
HDAC6-212ENST00000461608 EPN1Q9Y6I3 576 aaPredicted RBP3.36□□□□□ -1.87
HDAC6-212ENST00000461608 POLR2AP24928 1970 aaKnown RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 A0A087X0M5 115 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 A0A1B0GX30 115 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TMEM247A6NEH6 219 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 AGAP5A6NIR3 686 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TISP43B9A030 160 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 POC1B-GALNT4F8VUJ3 575 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 M0QZQ0 153 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 MASP2O00187 686 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 GRM8O00222 908 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 PEX12O00623 359 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TSPAN4O14817 238 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 KLK10O43240 276 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 HBP1O60381 514 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 GCATO75600 419 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 MBPP02686 304 aaPredicted RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CYP21A2P08686 494 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CSF1P09603 554 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ACP5P13686 325 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CPA1P15085 419 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 TGM2P21980 687 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CHMP24386 653 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 FPR3P25089 353 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 PSMA4P25789 261 aaKnown RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ITPKBP27987 946 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CXCR5P32302 372 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ADRA1BP35368 520 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 HOXD12P35452 270 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 HOXA4Q00056 320 aaPredicted RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CDK18Q07002 472 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 ALKBH1Q13686 389 aaKnown RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 CAMK1Q14012 370 aa3.35□□□□□ -1.87
HDAC6-212ENST00000461608 PDE1CQ14123 709 aaPredicted RBP3.35□□□□□ -1.87
HDAC6-212ENST00000461608 LRRC24Q50LG9 513 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms