RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ADARP55265 1226 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 MARC1Q5VT66 337 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 TTC27Q6P3X3 843 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 BTN2A1Q7KYR7 527 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 FAM151AQ8WW52 585 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CLCC1Q96S66 551 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 DCUN1D5Q9BTE7 237 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 THG1LQ9NWX6 298 aaKnown RBP9.18□□□□□ -0.94
BRCA1-205ENST00000461221 TRHDEQ9UKU6 1024 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 PCDHA3Q9Y5H8 950 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF521Q96K83 1311 aa9.18□□□□□ -0.94
BRCA1-205ENST00000461221 CCDC162PA2VCL2 907 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CCDC182A6NF36 153 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 B3GAT3O94766 335 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 PDHBP11177 359 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CYP11B1P15538 503 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 TAF8Q7Z7C8 310 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 DSG4Q86SJ6 1040 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 WDR49Q8IV35 697 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SAMD3Q8N6K7 520 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF483Q8TF39 744 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ING4Q9UNL4 249 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SAMD9Q5K651 1589 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ACSL4O60488 711 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CYP2F1P24903 491 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 MAPK9P45984 424 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 STARP49675 285 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SPIDRQ14159 915 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 FRG1Q14331 258 aaKnown RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 QPRTQ15274 297 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ZNHIT3Q15649 155 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 NFE2Q16621 373 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 IRGCQ6NXR0 463 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 BRINP3Q76B58 766 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 NT5DC3Q86UY8 548 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 KCNMB4Q86W47 210 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 AADATQ8N5Z0 425 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 DAGLBQ8NCG7 672 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 IGDCC4Q8TDY8 1250 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 HAVCR1Q96D42 359 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CBWD1Q9BRT8 395 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 C1QTNF7Q9BXJ2 289 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CIPCQ9C0C6 399 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 NRDE2Q9H7Z3 1164 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 PRDM8Q9NQV8 689 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 NDOR1Q9UHB4 597 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF232Q9UNY5 417 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SSNA1O43805 119 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 KCNH1O95259 989 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 NAA20P61599 178 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 EIF3MQ7L2H7 374 aaKnown RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ZDHHC17Q8IUH5 632 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SYT12Q8IV01 421 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SMYD1Q8NB12 490 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 TRPV3Q8NET8 790 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 KBTBD8Q8NFY9 601 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CAVIN3Q969G5 261 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SPATA5L1Q9BVQ7 753 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 GPATCH2LQ9NWQ4 482 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CLN6Q9NWW5 311 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 KLK14Q9P0G3 267 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CDH9Q9ULB4 789 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 PLAGL2Q9UPG8 496 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ADAMTS12P58397 1594 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 FAM205CA6NFA0 338 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 PPP1R3GB7ZBB8 358 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 TYMPP19971 482 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 FGFR2P21802 821 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 SCNN1BP51168 640 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 TCEA2Q15560 299 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 AMHR2Q16671 573 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 GLRA4Q5JXX5 417 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 LRRC74BQ6ZQY2 392 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF276Q8N554 614 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 LZTR1Q8N653 840 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 METTL6Q8TCB7 284 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 MYDGFQ969H8 173 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 UBE2E3Q969T4 207 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 FAM136AQ96C01 138 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 AHCYL2Q96HN2 611 aaKnown RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 MCCC1Q96RQ3 725 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-205ENST00000461221 TBCBQ99426 244 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 ZNF304Q9HCX3 659 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 TMEM138Q9NPI0 162 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 INVSQ9Y283 1065 aa9.17□□□□□ -0.94
BRCA1-205ENST00000461221 CCL15-CCL14A0A0B4J2E2 113 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 IGSF6O95976 241 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CCR1P32246 355 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 SMIM11AP58511 58 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 SMCO1Q147U7 214 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PTPAQ15257 358 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 CCL15Q16663 113 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ERMARDQ5T6L9 678 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 AMER2Q8N7J2 671 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 ZFP28Q8NHY6 868 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TBC1D16Q8TBP0 767 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 TMEM176AQ96HP8 235 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 PLA2G12BQ9BX93 195 aa9.16□□□□□ -0.94
BRCA1-205ENST00000461221 MTMR12Q9C0I1 747 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms