RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CENPCQ03188 943 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 LMAN2Q12907 356 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 MAP7D1Q3KQU3 841 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 FNDC3BQ53EP0 1204 aaKnown RBP23.25■■□□□ 1.31
TRAF4-207ENST00000461195 RABGAP1LQ5R372 815 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 TTC39BQ5VTQ0 682 aaPredicted RBP23.25■■□□□ 1.31
TRAF4-207ENST00000461195 PMS2CLQ68D20 193 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 CYB5D2Q8WUJ1 264 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 BAP1Q92560 729 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 TBCBQ99426 244 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 ARRDC1-AS1Q9H2J1 176 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 METTL5Q9NRN9 209 aaKnown RBP23.25■■□□□ 1.31
TRAF4-207ENST00000461195 SEPT11Q9NVA2 429 aaKnown RBP23.25■■□□□ 1.31
TRAF4-207ENST00000461195 PCDHGA5Q9Y5G8 931 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 SDK1Q7Z5N4 2213 aa23.25■■□□□ 1.31
TRAF4-207ENST00000461195 MUC22E2RYF6 1773 aaPredicted RBP23.24■■□□□ 1.31
TRAF4-207ENST00000461195 ABCA7Q8IZY2 2146 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 GOLGA6L19H0YKK7 550 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 MAP3K13O43283 966 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 PAGE1O75459 146 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 DLDP09622 509 aaKnown RBP23.24■■□□□ 1.31
TRAF4-207ENST00000461195 NR1I3Q14994 352 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 CSRP2Q16527 193 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 FUT11Q495W5 492 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 FSCBQ5H9T9 825 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 MRGPRX1Q96LB2 322 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 TKTL2Q9H0I9 626 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 SEMA4GQ9NTN9 838 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 ARHGEF38Q9NXL2 777 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 ADAM22Q9P0K1 906 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 KIAA1522Q9P206 1035 aaPredicted RBP23.24■■□□□ 1.31
TRAF4-207ENST00000461195 HS3ST4Q9Y661 456 aa23.24■■□□□ 1.31
TRAF4-207ENST00000461195 ZNF217O75362 1048 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 ADCY5O95622 1261 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 EPHX1P07099 455 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 FANCCQ00597 558 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 PTP4A2Q12974 167 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 AUHQ13825 339 aaKnown RBP23.23■■□□□ 1.31
TRAF4-207ENST00000461195 TRNP1Q6NT89 227 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 FBXL22Q6P050 247 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 IRF2BP2Q7Z5L9 587 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 PHF13Q86YI8 300 aaPredicted RBP23.23■■□□□ 1.31
TRAF4-207ENST00000461195 FRMD1Q8N878 549 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 TTC17Q96AE7 1141 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 CFAP57Q96MR6 1250 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 RPRD1AQ96P16 312 aaPredicted RBP23.23■■□□□ 1.31
TRAF4-207ENST00000461195 TMEM245Q9H330 911 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 DLL3Q9NYJ7 618 aa23.23■■□□□ 1.31
TRAF4-207ENST00000461195 MBD1Q9UIS9 605 aaPredicted RBP23.23■■□□□ 1.31
TRAF4-207ENST00000461195 A0A1B0GVM2 712 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 TCAF2A6NFQ2 919 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 LRRC53A6NM62 1247 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 MOCS3O95396 460 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 CALB1P05937 261 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 CSKP41240 450 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 LMNB2Q03252 620 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 PTPRNQ16849 979 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 KIAA1324Q6UXG2 1013 aaKnown RBP23.22■■□□□ 1.31
TRAF4-207ENST00000461195 LPCAT2Q7L5N7 544 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 PHLDB2Q86SQ0 1253 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 CIR1Q86X95 450 aaPredicted RBP23.22■■□□□ 1.31
TRAF4-207ENST00000461195 CCAR2Q8N163 923 aaKnown RBP23.22■■□□□ 1.31
TRAF4-207ENST00000461195 EMC1Q8N766 993 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 SIK2Q9H0K1 926 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 SLC6A17Q9H1V8 727 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 PRDM16Q9HAZ2 1276 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 INTS6Q9UL03 887 aaKnown RBP23.22■■□□□ 1.31
TRAF4-207ENST00000461195 VANGL2Q9ULK5 521 aa23.22■■□□□ 1.31
TRAF4-207ENST00000461195 FOXD2O60548 495 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-207ENST00000461195 ASLP04424 464 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 HLA-EP13747 358 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 RDXP35241 583 aaKnown RBP23.21■■□□□ 1.31
TRAF4-207ENST00000461195 MPLP40238 635 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 GSCP56915 257 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-207ENST00000461195 CREB5Q02930 508 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 SLC12A1Q13621 1099 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 RSPO4Q2I0M5 234 aaPredicted RBP23.21■■□□□ 1.31
TRAF4-207ENST00000461195 PITRM1Q5JRX3 1037 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 SLC36A4Q6YBV0 504 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 BNIPLQ7Z465 357 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 IGSF8Q969P0 613 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 EDEM3Q9BZQ6 932 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 ANLNQ9NQW6 1124 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 NUP205Q92621 2012 aa23.21■■□□□ 1.31
TRAF4-207ENST00000461195 SPTBN2O15020 2390 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 PDGFRAP16234 1089 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 TNFAIP3P21580 790 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 SDC4P31431 198 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 GGCXP38435 758 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 ATXN1P54253 815 aaKnown RBP23.2■■□□□ 1.3
TRAF4-207ENST00000461195 OXCT1P55809 520 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 UBASH3AP57075 661 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 ST8SIA6P61647 398 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 C1QBPQ07021 282 aaKnown RBP23.2■■□□□ 1.3
TRAF4-207ENST00000461195 CAMK2GQ13555 558 aaPredicted RBP23.2■■□□□ 1.3
TRAF4-207ENST00000461195 ASIC2Q16515 512 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 SPDYCQ5MJ68 293 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 PLA2G2CQ5R387 149 aa23.2■■□□□ 1.3
TRAF4-207ENST00000461195 ACBD5Q5T8D3 534 aaPredicted RBP23.2■■□□□ 1.3
TRAF4-207ENST00000461195 PRR23CQ6ZRP0 262 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms