RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 SNX16P57768 344 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 RPS14P62263 151 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 ZNF252P-AS1Q0IIN9 211 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 CDH18Q13634 790 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 ARID5BQ14865 1188 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 PLEKHG6Q3KR16 790 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 DCAF12L1Q5VU92 463 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 RAP1GAP2Q684P5 730 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 SLC47A2Q86VL8 602 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 CACUL1Q86Y37 369 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 CCDC117Q8IWD4 279 aaPredicted RBP12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 LGI2Q8N0V4 545 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 DEFB106AQ8N104 65 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 MINDY1Q8N5J2 469 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 ATP6V0D2Q8N8Y2 350 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 DEFB124Q8NES8 71 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 MRGPRX3Q96LB0 322 aa12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 DNAAF2Q9NVR5 837 aaKnown RBP12.22□□□□□ -0.45
SOX2-OT-201ENST00000460739 ITIH6Q6UXX5 1313 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 A0A1B0GTW7 788 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 H0Y626 953 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 OPHN1O60890 802 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 GJB3O75712 270 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 DNTTP04053 509 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 ERBB2P04626 1255 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 PNMA6AP0CW24 399 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 CCR1P32246 355 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 KRT9P35527 623 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 BPIFB4P59827 614 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 ST8SIA6P61647 398 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 CDK17Q00537 523 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 KCNMA1Q12791 1236 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 KCNJ12Q14500 433 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 HNRNPA1L2Q32P51 320 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 PTPN20Q4JDL3 420 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 HSP90AA4PQ58FG1 418 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 PITRM1Q5JRX3 1037 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 OLFML1Q6UWY5 402 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 MMS22LQ6ZRQ5 1243 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 C11orf57Q6ZUT1 292 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 FAM183BPQ6ZVS7 135 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 SLC26A9Q7LBE3 791 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 FAM124AQ86V42 546 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 CHSY1Q86X52 802 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 HDDC3Q8N4P3 179 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 C1orf131Q8NDD1 294 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 ZNF397Q8NF99 534 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 C1orf216Q8TAB5 229 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 PRMT1Q99873 361 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 RSPH9Q9H1X1 276 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 SLC32A1Q9H598 525 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 FAM204AQ9H8W3 233 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 SAMSN1Q9NSI8 373 aaKnown RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 LMBRD1Q9NUN5 540 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 DDIT4Q9NX09 232 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 KIAA1522Q9P206 1035 aaPredicted RBP12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 SLC12A6Q9UHW9 1150 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 WASF3Q9UPY6 502 aa12.21□□□□□ -0.45
SOX2-OT-201ENST00000460739 TPRP12270 2363 aaKnown RBP12.21□□□□□ -0.46
SOX2-OT-201ENST00000460739 NUMA1Q14980 2115 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 TP53BP1Q12888 1972 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 F5H5T6 163 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 DAB1O75553 588 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 GRAP2O75791 330 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 MOCS3O95396 460 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 SRPRAP08240 638 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 CD59P13987 128 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 ABCB4P21439 1286 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 EEF1GP26641 437 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 ACSL1P33121 698 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 CDH5P33151 784 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 NOS2P35228 1153 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 SLC6A3Q01959 620 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 MTA1Q13330 715 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 SLC14A1Q13336 389 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 SLC12A1Q13621 1099 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 DRAP1Q14919 205 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 TTC31Q49AM3 519 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 KLHDC7AQ5VTJ3 777 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 TTC39BQ5VTQ0 682 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 ZNF776Q68DI1 518 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 OR6B2Q6IFH4 312 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 ZDHHC17Q8IUH5 632 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 ZCCHC9Q8N567 271 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 OR2I1PQ8NGU4 316 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 NAA15Q9BXJ9 866 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 ZDHHC5Q9C0B5 715 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 MTG2Q9H4K7 406 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 C6orf106Q9H6K1 298 aaPredicted RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 EIF2B4Q9UI10 523 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 SCML1Q9UN30 329 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 ERVW-1Q9UQF0 538 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 PLXNA2O75051 1894 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 MAP1BP46821 2468 aaKnown RBP12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 FRYQ5TBA9 3013 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 USP24Q9UPU5 2620 aa12.2□□□□□ -0.46
SOX2-OT-201ENST00000460739 TMEM131Q92545 1883 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms