RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LRRC32Q14392 662 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 FBXO43Q4G163 708 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 GRAMD4Q6IC98 578 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 C12orf40Q86WS4 652 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 PSTKQ8IV42 348 aaKnown RBP23.19■■□□□ 1.3
C9orf3-209ENST00000460573 ZNF687Q8N1G0 1237 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 SYNPOQ8N3V7 929 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 ARFGAP1Q8N6T3 406 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 BHMTQ93088 406 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 RPRD1AQ96P16 312 aaPredicted RBP23.19■■□□□ 1.3
C9orf3-209ENST00000460573 RETREG1Q9H6L5 497 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 OSGEPQ9NPF4 335 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 OR12D3Q9UGF7 316 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 VANGL2Q9ULK5 521 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 FZD10Q9ULW2 581 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 USP18Q9UMW8 372 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 SLC27A6Q9Y2P4 619 aa23.19■■□□□ 1.3
C9orf3-209ENST00000460573 BTNL10A8MVZ5 291 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 PROSCO94903 275 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 KAT7O95251 611 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 APODP05090 189 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 MIPP30301 263 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 MAN1A1P33908 653 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 SGSHP51688 502 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 RPS24P62847 133 aaKnown RBP23.18■■□□□ 1.3
C9orf3-209ENST00000460573 ERMARDQ5T6L9 678 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 P2RY11Q96G91 374 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 BTBD6Q96KE9 485 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 ARHGEF4Q9NR80 690 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 TMPRSS4Q9NRS4 437 aa23.18■■□□□ 1.3
C9orf3-209ENST00000460573 CACNA1IQ9P0X4 2223 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 IGLV3-10A0A075B6K4 115 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 A0A1B0GVM2 712 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 TCAF2A6NFQ2 919 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 DRGXA6NNA5 263 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 E9PAM4 449 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 PJA2O43164 708 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 CISD3P0C7P0 127 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 CCINQ13939 588 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 HADHQ16836 314 aaKnown RBP23.17■■□□□ 1.3
C9orf3-209ENST00000460573 BOLA3Q53S33 107 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 FSTL4Q6MZW2 842 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 CHST9Q7L1S5 443 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 C14orf80Q86SX3 495 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 KIAA1328Q86T90 577 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 MFN1Q8IWA4 741 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 PHTF2Q8N3S3 785 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 ACRBPQ8NEB7 543 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 FIBINQ8TAL6 211 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 ATRIPQ8WXE1 791 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 CLDN23Q96B33 292 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 MYEOVQ96EZ4 313 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 STIM2Q9P246 746 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 PPARGC1AQ9UBK2 798 aaKnown RBP23.17■■□□□ 1.3
C9orf3-209ENST00000460573 PCSK1NQ9UHG2 260 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 FBXO4Q9UKT5 387 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 REXO2Q9Y3B8 237 aaKnown RBP23.17■■□□□ 1.3
C9orf3-209ENST00000460573 MYOFQ9NZM1 2061 aa23.17■■□□□ 1.3
C9orf3-209ENST00000460573 ZFHX2Q9C0A1 2572 aaPredicted RBP23.16■■□□□ 1.3
C9orf3-209ENST00000460573 CLDN11O75508 207 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 LUC7L3O95232 432 aaKnown RBP23.16■■□□□ 1.3
C9orf3-209ENST00000460573 CHRNB1P11230 501 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 L1CAMP32004 1257 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 TNFRSF4P43489 277 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 NOP2P46087 812 aaKnown RBP23.16■■□□□ 1.3
C9orf3-209ENST00000460573 RPS9P46781 194 aaKnown RBP23.16■■□□□ 1.3
C9orf3-209ENST00000460573 CDH4P55283 916 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 OXCT1P55809 520 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 NAIF1Q69YI7 327 aaPredicted RBP23.16■■□□□ 1.3
C9orf3-209ENST00000460573 ZNF683Q8IZ20 524 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 CFAP52Q8N1V2 620 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 TERB1Q8NA31 727 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 IGSF8Q969P0 613 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 FBRSL1Q9HCM7 1045 aaKnown RBP23.16■■□□□ 1.3
C9orf3-209ENST00000460573 AP4E1Q9UPM8 1137 aa23.16■■□□□ 1.3
C9orf3-209ENST00000460573 TBC1D3BA6NDS4 549 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 H0Y626 953 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 SRGAP2O75044 1071 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 HTR7P34969 479 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 ZNF135P52742 658 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-209ENST00000460573 KDSRQ06136 332 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 FZD5Q13467 585 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 CDH18Q13634 790 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 MESDQ14696 234 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 E2F5Q15329 346 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 CARNMT1Q8N4J0 409 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.15■■□□□ 1.3
C9orf3-209ENST00000460573 TEKT4Q8WW24 435 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 EPAS1Q99814 870 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 IER2Q9BTL4 223 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 ZYG11BQ9C0D3 744 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 LMAN1LQ9HAT1 526 aa23.15■■□□□ 1.3
C9orf3-209ENST00000460573 F5P12259 2224 aa23.14■■□□□ 1.3
C9orf3-209ENST00000460573 PTPRZ1P23471 2315 aaPredicted RBP23.14■■□□□ 1.3
C9orf3-209ENST00000460573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.14■■□□□ 1.29
C9orf3-209ENST00000460573 EGFP01133 1207 aa23.14■■□□□ 1.29
C9orf3-209ENST00000460573 PTMAP06454 111 aaKnown RBP23.14■■□□□ 1.29
C9orf3-209ENST00000460573 GGCXP38435 758 aa23.14■■□□□ 1.29
C9orf3-209ENST00000460573 SLC1A1P43005 524 aa23.14■■□□□ 1.29
C9orf3-209ENST00000460573 CCZ1BP86790 482 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms