RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, human

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-215	ENST00000460158	TBC1D3F	A6NER0	549 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	AGAP5	A6NIR3	686 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	LINC01548	A6NM66	108 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TTC34	A8MYJ7	566 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TBC1D3L	B9A6J9	549 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TMEM232	C9JQI7	657 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158		E7EVH7	732 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	MASP2	O00187	686 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	CLGN	O14967	610 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	HEXIM1	O94992	359 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	SLC3A2	P08195	630 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	CYP3A4	P08684	503 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TBC1D3H	P0C7X1	549 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	SLC8A1	P32418	973 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	GRK5	P34947	590 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	HOXD12	P35452	270 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	IDUA	P35475	653 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	C21orf58	P58505	322 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TAS2R50	P59544	299 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	NHLH1	Q02575	133 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TLE3	Q04726	772 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	PPFIA1	Q13136	1202 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	DDX10	Q13206	875 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	PDCL	Q13371	301 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	SEC23B	Q15437	767 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	FAM133B	Q5BKY9	247 aa	Known RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TBC1D3G	Q6DHY5	549 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TBC1D3C	Q6IPX1	549 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	WDR93	Q6P2C0	686 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	SYT13	Q7L8C5	426 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	MAATS1	Q7Z4T9	603 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TFAP2D	Q7Z6R9	452 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	KRT77	Q7Z794	578 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	ANKRD23	Q86SG2	305 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TBC1D3	Q8IZP1	549 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	HASPIN	Q8TF76	798 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	NTN5	Q8WTR8	489 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	CLEC4C	Q8WTT0	213 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	AFG1L	Q8WV93	481 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	THAP4	Q8WY91	577 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	DPF1	Q92782	380 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	GOLGA1	Q92805	767 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	TRIM63	Q969Q1	353 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	GPR78	Q96P69	363 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	EFHD1	Q9BUP0	239 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	RNF26	Q9BY78	433 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	NUAK2	Q9H093	628 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	CWC25	Q9NXE8	425 aa	Predicted RBP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	NDUFAF4	Q9P032	175 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	FEM1B	Q9UK73	627 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	RCE1	Q9Y256	329 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	PCDHA10	Q9Y5I2	948 aa		3.75	□□□□□ -1.81
VPS8-215	ENST00000460158	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158		A0A1W2PRQ8	180 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	WIPF3	A6NGB9	483 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	FAM90A20P	A6NIJ5	464 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	MBD3L5	A6NJ08	208 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	PRSS47	A8MTI9	375 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	RRH	O14718	337 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	IRAK2	O43187	625 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	PRKCG	P05129	697 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	FAM200B	P0CF97	657 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	CD38	P28907	300 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	AARS	P49588	968 aa	Known RBP eCLIP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	ZNF84	P51523	738 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	SLC37A1	P57057	533 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	NUCB1	Q02818	461 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	PFKFB3	Q16875	520 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	LRRC24	Q50LG9	513 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	C1QTNF12	Q5T7M4	302 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	JAKMIP3	Q5VZ66	844 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	DGAT2L7P	Q6IED9	249 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	SYNE3	Q6ZMZ3	975 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	ZNF66	Q6ZN08	573 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	RFX8	Q6ZV50	586 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	CHCHD4	Q8N4Q1	142 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	C8orf58	Q8NAV2	365 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	SPPL3	Q8TCT6	385 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	ASB12	Q8WXK4	309 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	RSPH1	Q8WYR4	309 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	NELL1	Q92832	810 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	CELF1	Q92879	486 aa	Known RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	ZNF845	Q96IR2	970 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	C5orf34	Q96MH7	638 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	GATA5	Q9BWX5	397 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	ARHGAP39	Q9C0H5	1083 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	TWSG1	Q9GZX9	223 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	CHODL	Q9H9P2	273 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	G6PC2	Q9NQR9	355 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	ADARB2	Q9NS39	739 aa	Known RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	ARL8B	Q9NVJ2	186 aa		3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	SIRT4	Q9Y6E7	314 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-215	ENST00000460158	CYP3A7-CYP3A51P	A0A087WV96	503 aa		3.73	□□□□□ -1.81
VPS8-215	ENST00000460158	RBMXL2	O75526	392 aa	Known RBP	3.73	□□□□□ -1.81
VPS8-215	ENST00000460158	LATS1	O95835	1130 aa		3.73	□□□□□ -1.81
VPS8-215	ENST00000460158	ALDOA	P04075	364 aa	Known RBP	3.73	□□□□□ -1.81
VPS8-215	ENST00000460158	RPN1	P04843	607 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms