RNA–Protein interactions for RNA: ENST00000460060.5

C4A-244, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 3

Gene C4A, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-244ENST00000460060 RBM41Q96IZ5 413 aaKnown RBP13.2□□□□□ -0.3
C4A-244ENST00000460060 ZSWIM3Q96MP5 696 aa13.2□□□□□ -0.3
C4A-244ENST00000460060 PEBP4Q96S96 227 aa13.2□□□□□ -0.3
C4A-244ENST00000460060 TUBB2BQ9BVA1 445 aa13.2□□□□□ -0.3
C4A-244ENST00000460060 WDCPQ9H6R7 721 aa13.2□□□□□ -0.3
C4A-244ENST00000460060 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
C4A-244ENST00000460060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.3
C4A-244ENST00000460060 FZD10Q9ULW2 581 aa13.2□□□□□ -0.3
C4A-244ENST00000460060 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
C4A-244ENST00000460060 HBS1LQ9Y450 684 aaKnown RBP13.2□□□□□ -0.3
C4A-244ENST00000460060 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.2□□□□□ -0.3
C4A-244ENST00000460060 C2orf78A6NCI8 922 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 SOBPA7XYQ1 873 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CEP104O60308 925 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 SRGAP2O75044 1071 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 LRP3O75074 770 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 KRT1P04264 644 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 SLC2A3P11169 496 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 PYGMP11217 842 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 GJA1P17302 382 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 PFKLP17858 780 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CCR1P32246 355 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CXCR5P32302 372 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CETN2P41208 172 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CXCL12P48061 93 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CYP4F8P98187 520 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 RING1Q06587 406 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 ZNF211Q13398 564 aaPredicted RBP13.19□□□□□ -0.3
C4A-244ENST00000460060 GAS6Q14393 721 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 SMTNL2Q2TAL5 461 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 ARHGAP15Q53QZ3 475 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 ZC3H12AQ5D1E8 599 aaKnown RBP13.19□□□□□ -0.3
C4A-244ENST00000460060 TXNDC8Q6A555 127 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CYP4V2Q6ZWL3 525 aaPredicted RBP13.19□□□□□ -0.3
C4A-244ENST00000460060 CCDC185Q8N715 623 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 KCTD6Q8NC69 237 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 SHKBP1Q8TBC3 707 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 NETO1Q8TDF5 533 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 COG1Q8WTW3 980 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 DEPDC1BQ8WUY9 529 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 SLC39A13Q96H72 371 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 FCRL2Q96LA5 508 aaPredicted RBP13.19□□□□□ -0.3
C4A-244ENST00000460060 SNRNP25Q9BV90 132 aaKnown RBP13.19□□□□□ -0.3
C4A-244ENST00000460060 RNF38Q9H0F5 515 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 TRPV4Q9HBA0 871 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 CDC23Q9UJX2 597 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 PIAS3Q9Y6X2 628 aa13.19□□□□□ -0.3
C4A-244ENST00000460060 HRO43593 1189 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 OLFM2O95897 454 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 APOEP02649 317 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 HDCP19113 662 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 KDELR1P24390 212 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 DDX6P26196 483 aaKnown RBP eCLIP13.18□□□□□ -0.3
C4A-244ENST00000460060 VIPR2P41587 438 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 MLLT6P55198 1093 aaPredicted RBP13.18□□□□□ -0.3
C4A-244ENST00000460060 COG7P83436 770 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 SATB1Q01826 763 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 SCAPQ12770 1279 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 KRT81Q14533 505 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 PDK2Q15119 407 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 DCAF12L1Q5VU92 463 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 PRR23BQ6ZRT6 265 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 MAP7D3Q8IWC1 876 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 MFSD6LQ8IWD5 586 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 RAPGEF5Q92565 580 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 RNF25Q96BH1 459 aaPredicted RBP13.18□□□□□ -0.3
C4A-244ENST00000460060 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
C4A-244ENST00000460060 ANLNQ9NQW6 1124 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.18□□□□□ -0.3
C4A-244ENST00000460060 KLHL11Q9NVR0 708 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 GPATCH2LQ9NWQ4 482 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 ARHGEF38Q9NXL2 777 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 RNF14Q9UBS8 474 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 SLC12A6Q9UHW9 1150 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 AP4E1Q9UPM8 1137 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 SPAG17Q6Q759 2223 aa13.18□□□□□ -0.3
C4A-244ENST00000460060 CHD8Q9HCK8 2581 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 TRAV19A0A0A6YYK7 116 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.17□□□□□ -0.3
C4A-244ENST00000460060 LRRD1A4D1F6 860 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 HEPACAM2A8MVW5 462 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 KCNU1A8MYU2 1149 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 ARNTLO00327 626 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 ZNF185O15231 689 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 IGLV3-27P01718 113 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 CKMP06732 381 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 HMBSP08397 361 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 MBL2P11226 248 aaPredicted RBP13.17□□□□□ -0.3
C4A-244ENST00000460060 L1CAMP32004 1257 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 ARSEP51690 589 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 CDH6P55285 790 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 COPS2P61201 443 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 SLC7A9P82251 487 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 MTA1Q13330 715 aa13.17□□□□□ -0.3
C4A-244ENST00000460060 SIM2Q14190 667 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms