RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 NOS2P35228 1153 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 ST8SIA6P61647 398 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 SLC6A3Q01959 620 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 CDH18Q13634 790 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TTC31Q49AM3 519 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 C5orf22Q49AR2 442 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 DCAF6Q58WW2 860 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TCP11X2Q5H9J9 407 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 RABGAP1LQ5R372 815 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 KLHDC7AQ5VTJ3 777 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 SYPL2Q5VXT5 272 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TCEAL6Q6IPX3 200 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 DPY19L2P1Q6NXN4 242 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 GJB7Q6PEY0 223 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 OLFML1Q6UWY5 402 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 SLC41A1Q8IVJ1 513 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 FRMD1Q8N878 549 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TMEM35BQ8NCS4 154 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TCEAL3Q969E4 200 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 NT5C3BQ969T7 300 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TOE1Q96GM8 510 aaKnown RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 HSPA12BQ96MM6 686 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 PRICKLE1Q96MT3 831 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 CPXM1Q96SM3 734 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 PRMT1Q99873 361 aaKnown RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 NAA15Q9BXJ9 866 aaKnown RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 STK33Q9BYT3 514 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 SMOC1Q9H4F8 434 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 SLC32A1Q9H598 525 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 SGK2Q9HBY8 427 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TMEM74BQ9NUR3 256 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 DNAAF2Q9NVR5 837 aaKnown RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 STAP1Q9ULZ2 295 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 KMT2BQ9UMN6 2715 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 A0A1B0GTW7 788 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 A0A1B0GVM2 712 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 TCAF2A6NFQ2 919 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 PATE3B3GLJ2 98 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 RNASEH1O60930 286 aaKnown RBP10.35□□□□□ -0.75
HDLBP-228ENST00000459788 CALCAP01258 141 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 ZNF883P0CG24 379 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 UCHL3P15374 230 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 ENGP17813 658 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 PMLP29590 882 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 CD70P32970 193 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 MATKP42679 507 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 ATXN3P54252 364 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-228ENST00000459788 DRAP1Q14919 205 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-228ENST00000459788 HNRNPA1L2Q32P51 320 aaKnown RBP10.35□□□□□ -0.75
HDLBP-228ENST00000459788 ZC3H12AQ5D1E8 599 aaKnown RBP10.35□□□□□ -0.75
HDLBP-228ENST00000459788 BRMS1LQ5PSV4 323 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 CDKAL1Q5VV42 579 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 RFWD3Q6PCD5 774 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 IL27RAQ6UWB1 636 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 SLC47A2Q86VL8 602 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 DEFB106AQ8N104 65 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 HDDC3Q8N4P3 179 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
HDLBP-228ENST00000459788 RSPH9Q9H1X1 276 aaPredicted RBP10.35□□□□□ -0.75
HDLBP-228ENST00000459788 RETREG1Q9H6L5 497 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 SYNCQ9H7C4 482 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 FAM204AQ9H8W3 233 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 PRSS16Q9NQE7 514 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 DDIT4Q9NX09 232 aa10.35□□□□□ -0.75
HDLBP-228ENST00000459788 EDDM13A0A1B0GTR0 161 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 CXorf51AA0A1B0GTR3 108 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 GOLGA6L7A0A1B0GV03 622 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 LRRC10BA6NIK2 292 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 MEI4A8MW99 385 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 H0Y626 953 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 OPHN1O60890 802 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 MBD3O95983 291 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 DNTTP04053 509 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 CFIP05156 583 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 CYP11B1P15538 503 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 NNMTP40261 264 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 CSKP41240 450 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 CXCR3P49682 368 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 SGSHP51688 502 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 RPS24P62847 133 aaKnown RBP10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ECT2LQ008S8 904 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 KCNMA1Q12791 1236 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 SEMA3BQ13214 749 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 PLEKHG6Q3KR16 790 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 PTPN20Q4JDL3 420 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ZNF776Q68DI1 518 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-228ENST00000459788 OR6B2Q6IFH4 312 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 FAM183BPQ6ZVS7 135 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 SND1Q7KZF4 910 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ARMCX6Q7L4S7 300 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 PIP4P1Q86T03 277 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 CHSY1Q86X52 802 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 RGL4Q8IZJ4 473 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 LGI2Q8N0V4 545 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 ANKRD20A12PQ8NF67 263 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 WFDC5Q8TCV5 224 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 SORCS1Q8WY21 1168 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 C18orf8Q96DM3 657 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 MYO19Q96H55 970 aa10.34□□□□□ -0.75
HDLBP-228ENST00000459788 MRGPRX3Q96LB0 322 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms