RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 LMAN2Q12907 356 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 NME3Q13232 169 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 CAMK2GQ13555 558 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-203ENST00000459756 PTPRNQ16849 979 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 FAM102AQ5T9C2 384 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-203ENST00000459756 NAA35Q5VZE5 725 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 LYSMD4Q5XG99 296 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 XYLT1Q86Y38 959 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 TMPRSS6Q8IU80 811 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 CPA5Q8WXQ8 436 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 PIGKQ92643 395 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 PRCCQ92733 491 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-203ENST00000459756 NT5C3BQ969T7 300 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 TTC17Q96AE7 1141 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 NPY6RQ99463 290 aa16.67■□□□□ 0.26
COL7A1-203ENST00000459756 PRMT1Q99873 361 aaKnown RBP16.67■□□□□ 0.26
COL7A1-203ENST00000459756 TNRC6BQ9UPQ9 1833 aaKnown RBP16.66■□□□□ 0.26
COL7A1-203ENST00000459756 H0Y626 953 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 KHNYNO15037 678 aaKnown RBP16.66■□□□□ 0.26
COL7A1-203ENST00000459756 MOCS3O95396 460 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 ASLP04424 464 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 ATP1A3P13637 1013 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 HLA-EP13747 358 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 PTMSP20962 102 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 HOXD12P35452 270 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 CSKP41240 450 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 COPAP53621 1224 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 RABGAP1LQ5R372 815 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 TCEAL6Q6IPX3 200 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 TRIM72Q6ZMU5 477 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 SND1Q7KZF4 910 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL7A1-203ENST00000459756 ARMCX6Q7L4S7 300 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 SYT12Q8IV01 421 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 SLC20A1Q8WUM9 679 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 TCEAL3Q969E4 200 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 SIPA1Q96FS4 1042 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 FBRSQ9HAH7 460 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 ITM2CQ9NQX7 267 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 KIAA1522Q9P206 1035 aaPredicted RBP16.66■□□□□ 0.26
COL7A1-203ENST00000459756 USP36Q9P275 1121 aaKnown RBP16.66■□□□□ 0.26
COL7A1-203ENST00000459756 PAXBP1Q9Y5B6 917 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 CEP192Q8TEP8 1941 aa16.66■□□□□ 0.26
COL7A1-203ENST00000459756 A0A1B0GVM2 712 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 TCAF2A6NFQ2 919 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 NDUFS2O75306 463 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 F9P00740 461 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 CYP1A1P04798 512 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-203ENST00000459756 C7P10643 843 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 CHRNB2P17787 502 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 CD6P30203 668 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 CXCR3P49682 368 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 ST8SIA6P61647 398 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 FMO1Q01740 532 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 SLC12A1Q13621 1099 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 AUHQ13825 339 aaKnown RBP16.65■□□□□ 0.26
COL7A1-203ENST00000459756 SLC25A52Q3SY17 297 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 FSCBQ5H9T9 825 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 PITRM1Q5JRX3 1037 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 BRMS1LQ5PSV4 323 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 OTUD1Q5VV17 481 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-203ENST00000459756 ARCQ7LC44 396 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 KDM1BQ8NB78 822 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 OR2T3Q8NH03 318 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 PGAP3Q96FM1 320 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-203ENST00000459756 RXFP3Q9NSD7 469 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 PIGVQ9NUD9 493 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 SUN2Q9UH99 717 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 EVLQ9UI08 416 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-203ENST00000459756 PILRBQ9UKJ0 227 aa16.65■□□□□ 0.26
COL7A1-203ENST00000459756 INTS6Q9UL03 887 aaKnown RBP16.65■□□□□ 0.26
COL7A1-203ENST00000459756 LNP1A1A4G5 178 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 GOLGA8SH3BPF8 625 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 PAGE1O75459 146 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 IGLV3-19P01714 112 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 ACADMP11310 421 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 MMP8P22894 467 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 OXTRP30559 389 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 SULT1E1P49888 294 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 TPMTP51580 245 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 OXCT1P55809 520 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF33AQ06730 810 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 KLHL40Q2TBA0 621 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 C2CD6Q53TS8 623 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 STPG1Q5TH74 334 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 PEAR1Q5VY43 1037 aaPredicted RBP16.64■□□□□ 0.25
COL7A1-203ENST00000459756 IL31Q6EBC2 164 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 FBXL22Q6P050 247 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 MMS22LQ6ZRQ5 1243 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 DHX40Q8IX18 779 aaKnown RBP16.64■□□□□ 0.25
COL7A1-203ENST00000459756 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.25
COL7A1-203ENST00000459756 DEFB119Q8N690 84 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 RPRD1AQ96P16 312 aaPredicted RBP16.64■□□□□ 0.25
COL7A1-203ENST00000459756 ADAM33Q9BZ11 813 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 WDCPQ9H6R7 721 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 CD93Q9NPY3 652 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 ARHGEF38Q9NXL2 777 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 TMEM59LQ9UK28 342 aa16.64■□□□□ 0.25
COL7A1-203ENST00000459756 FAM170AA1A519 330 aa16.63■□□□□ 0.25
COL7A1-203ENST00000459756 DCDC2BA2VCK2 349 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms