RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 HNRNPDQ14103 355 aaKnown RBP16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 CCDC157Q569K6 752 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 FAM133BQ5BKY9 247 aaKnown RBP16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 PIK3R6Q5UE93 754 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 GJB7Q6PEY0 223 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 TRIM65Q6PJ69 517 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 GBP6Q6ZN66 633 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 CARNMT1Q8N4J0 409 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 WFDC5Q8TCV5 224 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 FAM81BQ96LP2 452 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 NUP58Q9BVL2 599 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 APOBEC2Q9Y235 224 aaKnown RBP16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 TLR6Q9Y2C9 796 aa16.34■□□□□ 0.21
CHCHD3-204ENST00000457942 FLNBO75369 2602 aaKnown RBP16.33■□□□□ 0.21
CHCHD3-204ENST00000457942 APC2O95996 2303 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 KCNJ18B7U540 433 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 E5RJQ4 531 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 DLDP09622 509 aaKnown RBP16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 ST8SIA6P61647 398 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 MPP7Q5T2T1 576 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 DCAF12L1Q5VU92 463 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 NADSYN1Q6IA69 706 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 TAC4Q86UU9 113 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 ADIPOR2Q86V24 386 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 ZNF606Q8WXB4 792 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 FCRL2Q96LA5 508 aaPredicted RBP16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 PRICKLE1Q96MT3 831 aaPredicted RBP16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 IRX2Q9BZI1 471 aaPredicted RBP16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 ACP6Q9NPH0 428 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 TJP2Q9UDY2 1190 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 PCOLCE2Q9UKZ9 415 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 CNTN6Q9UQ52 1028 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 CEP83Q9Y592 693 aa16.33■□□□□ 0.2
CHCHD3-204ENST00000457942 HELZ2Q9BYK8 2649 aaKnown RBP16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 SYNJ2BP-COX16A0A087WUM0 186 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 A0A1B0GTW7 788 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 FAM149AA5PLN7 773 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 DNTTP04053 509 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 SLC9A1P19634 815 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 RPS24P62847 133 aaKnown RBP16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 PDCLQ13371 301 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 NNTQ13423 1086 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 CAMK2GQ13555 558 aaPredicted RBP16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 MEA1Q16626 185 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 TTC31Q49AM3 519 aaPredicted RBP16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 CHSY1Q86X52 802 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 PASD1Q8IV76 773 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 CADM4Q8NFZ8 388 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 AZIN2Q96A70 460 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 DCBLD2Q96PD2 775 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 MED15Q96RN5 788 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 NUCKS1Q9H1E3 243 aaKnown RBP16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 TMEM245Q9H330 911 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 FAM204AQ9H8W3 233 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 FBRSQ9HAH7 460 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 POPDC2Q9HBU9 364 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 COX16Q9P0S2 106 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 APEX2Q9UBZ4 518 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 KALRNO60229 2985 aa16.32■□□□□ 0.2
CHCHD3-204ENST00000457942 PAPSS1O43252 624 aaPredicted RBP16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 MOCS3O95396 460 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 FYNP06241 537 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 APBA1Q02410 837 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 SLC14A1Q13336 389 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 PTPRNQ16849 979 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 SYPL2Q5VXT5 272 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 RAP1GAP2Q684P5 730 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 LGI2Q8N0V4 545 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 CFAP52Q8N1V2 620 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 GANCQ8TET4 914 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 STK32AQ8WU08 396 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 RNF34Q969K3 372 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 NOX5Q96PH1 765 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 SLC4A5Q9BY07 1137 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 SUN2Q9UH99 717 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 EIF2B4Q9UI10 523 aaKnown RBP16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 FNDC3AQ9Y2H6 1198 aaKnown RBP16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 NUMA1Q14980 2115 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 PTPRBP23467 1997 aa16.31■□□□□ 0.2
CHCHD3-204ENST00000457942 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 CBFA2T3O75081 653 aa16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 TRUB2O95900 331 aaKnown RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 ASLP04424 464 aa16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 ATXN1LP0C7T5 689 aaKnown RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 CSKP41240 450 aa16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 RPL34P49207 117 aaKnown RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 YWHAZP63104 245 aaKnown RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 CYP4F3Q08477 520 aa16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 DCAF6Q58WW2 860 aa16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 RNF219Q5W0B1 726 aaPredicted RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 ZNF776Q68DI1 518 aaPredicted RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 KIAA0907Q7Z7F0 614 aaPredicted RBP16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 ATP6V0D2Q8N8Y2 350 aa16.3■□□□□ 0.2
CHCHD3-204ENST00000457942 MLKLQ8NB16 471 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms