RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 TRPM5Q9NZQ8 1165 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 IPPQ9Y573 584 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 M0QYT0 321 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 GIPC1O14908 333 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 PFDN6O15212 129 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 GMNNO75496 209 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 TCEA3O75764 348 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 PGM3O95394 542 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 CYP2C18P33260 490 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 ARHGAP15Q53QZ3 475 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 RNF168Q8IYW5 571 aaPredicted RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 PAWRQ96IZ0 340 aaKnown RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 IPO11Q9UI26 975 aaKnown RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 RABGEF1Q9UJ41 708 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 MSRAQ9UJ68 235 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 TSPAN16Q9UKR8 245 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 PCDHB5Q9Y5E4 795 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 DHX15O43143 795 aaKnown RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 GLRA3O75311 464 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 TBX10O75333 385 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 HNRNPCP07910 306 aaKnown RBP eCLIP16.73■□□□□ 0.273e-7■□□□□ 8.9
LSS-205ENST00000457828 CD48P09326 243 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 RALBP11234 206 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 SLC1A6P48664 564 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 HARS2P49590 506 aaKnown RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 MGAT5Q09328 741 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 FRMD8Q9BZ67 464 aaPredicted RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 PHACTR1Q9C0D0 580 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 THAP1Q9NVV9 213 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 ETAA1Q9NY74 926 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 MYL4P12829 197 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 ZFXP17010 805 aaPredicted RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 EPHB3P54753 998 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 SIX1Q15475 284 aaPredicted RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 SLC24A5Q71RS6 500 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 PDZD8Q8NEN9 1154 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 FIZ1Q96SL8 496 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 UPF3AQ9H1J1 476 aaKnown RBP16.73■□□□□ 0.27
LSS-205ENST00000457828 CDY1Q9Y6F8 540 aa16.73■□□□□ 0.27
LSS-205ENST00000457828 CNTNAP2Q9UHC6 1331 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 SEC24DO94855 1032 aaPredicted RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 CDKN2BP42772 138 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 C17orf99Q6UX52 265 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 KDELC2Q7Z4H8 507 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 SLC2A14Q8TDB8 520 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 PTPN18Q99952 460 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 DDX18Q9NVP1 670 aaKnown RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 COQ4Q9Y3A0 265 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 CST3P01034 146 aaPredicted RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 AMPD1P23109 780 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 EEF1B2P24534 225 aaKnown RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 ANKS1BQ7Z6G8 1248 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 ZNF483Q8TF39 744 aaPredicted RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 SGF29Q96ES7 293 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 FAXDC2Q96IV6 333 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 APOBEC3GQ9HC16 384 aaKnown RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 LYPLA1O75608 230 aaPredicted RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 CLPTM1O96005 669 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 ARL2P36404 184 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 SLC39A12Q504Y0 691 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 RHBDF2Q6PJF5 856 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 LAYNQ6UX15 382 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 SNRNP27Q8WVK2 155 aaKnown RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.72■□□□□ 0.27
LSS-205ENST00000457828 CLIC5Q9NZA1 410 aa16.72■□□□□ 0.27
LSS-205ENST00000457828 STX18Q9P2W9 335 aaKnown RBP16.72■□□□□ 0.27
LSS-205ENST00000457828 ABCG1P45844 678 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 TKTL1P51854 596 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 TLDC1Q6P9B6 456 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 USP6NLQ92738 828 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 USP13Q92995 863 aaPredicted RBP16.71■□□□□ 0.27
LSS-205ENST00000457828 GOLGA2P5Q9HBQ8 144 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 SLC39A10Q9ULF5 831 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 RPL26L1Q9UNX3 145 aaKnown RBP16.71■□□□□ 0.27
LSS-205ENST00000457828 ZNF711Q9Y462 761 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
LSS-205ENST00000457828 RNF103-CHMP3A0A140T963 221 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 C22orf31O95567 290 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 CYP1A1P04798 512 aaPredicted RBP16.71■□□□□ 0.27
LSS-205ENST00000457828 POLBP06746 335 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 GLRBP48167 497 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 ADGRD1Q6QNK2 874 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 NUDT18Q6ZVK8 323 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 TDRPQ86YL5 185 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 APOL2Q9BQE5 337 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 FSD1LQ9BXM9 530 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 MYH1P12882 1939 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 MYH4Q9Y623 1939 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 WDR27A2RRH5 827 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 FGBP02675 491 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 MBL2P11226 248 aaPredicted RBP16.71■□□□□ 0.27
LSS-205ENST00000457828 BDNFP23560 247 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 GRM5P41594 1212 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 EFEMP1Q12805 493 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 NKD2Q969F2 451 aaPredicted RBP16.71■□□□□ 0.27
LSS-205ENST00000457828 PABPC5Q96DU9 382 aaKnown RBP16.71■□□□□ 0.27
LSS-205ENST00000457828 ECSITQ9BQ95 431 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 CHST12Q9NRB3 414 aa16.71■□□□□ 0.27
LSS-205ENST00000457828 ARHGAP28Q9P2N2 729 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms