RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 RTN3O95197 1032 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TNFAIP8O95379 198 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 METTL18O95568 372 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZCCHC18P0CG32 403 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TXNP10599 105 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 COL6A2P12110 1019 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LCP1P13796 627 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PAMP19021 973 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ITGAXP20702 1163 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 KCNA4P22459 653 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MGAT1P26572 445 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PSMB4P28070 264 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ADORA2BP29275 332 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 AXLP30530 894 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 GSTT1P30711 240 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SERPINB5P36952 375 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PPARGP37231 505 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MATKP42679 507 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RPL5P46777 297 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ALDH1A3P47895 512 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 NPY2RP49146 381 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 HARS2P49590 506 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TAF6P49848 677 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 IDH3AP50213 366 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 NUDT2P50583 147 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TUBP50607 506 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RPL14P50914 215 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RAB27AP51159 221 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LIMK2P53671 638 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 HIRAP54198 1017 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC12A2P55011 1212 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 HDAC4P56524 1084 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TPI1P60174 286 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CCNA1P78396 465 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC25A3Q00325 362 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 GBE1Q04446 702 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MPP3Q13368 585 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 BIRC2Q13490 618 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC12A1Q13621 1099 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CYLC2Q14093 348 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 DPYSQ14117 519 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PDE1CQ14123 709 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 FLOT2Q14254 428 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PCLAFQ15004 111 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PDK3Q15120 406 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CA9Q16790 459 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ANO4Q32M45 955 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MAP7D1Q3KQU3 841 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC25A52Q3SY17 297 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SV2CQ496J9 727 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TMEM259Q4ZIN3 620 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RABGAP1LQ5R372 815 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PPP1R26Q5T8A7 1209 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 THEMIS2Q5TEJ8 643 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RNF220Q5VTB9 566 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LIPMQ5VYY2 423 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARMC3Q5W041 872 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 NCBP2-AS2Q69YL0 99 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 NXNQ6DKJ4 435 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 NAPEPLDQ6IQ20 393 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 C16orf46Q6P387 395 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 NOTUMQ6P988 496 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC27A1Q6PCB7 646 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TRMT10BQ6PF06 316 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZCCHC23Q6ZST2 131 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RAPH1Q70E73 1250 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF534Q76KX8 674 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 EEPD1Q7L9B9 569 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CATSPER4Q7RTX7 472 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PID1Q7Z2X4 250 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SAMD7Q7Z3H4 446 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARHGAP22Q7Z5H3 698 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARPINQ7Z6K5 226 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 STRA8Q7Z7C7 330 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 LINC00523Q86TU6 105 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ACOT1Q86TX2 421 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RSPH3Q86UC2 560 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SPATA24Q86W54 205 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CDR2LQ86X02 465 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 C10orf107Q8IVU9 208 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 FBXO16Q8IX29 292 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ADGRF2Q8IZF7 708 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 UNC5BQ8IZJ1 945 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 DCLK2Q8N568 766 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC25A41Q8N5S1 370 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 POU5F2Q8N7G0 328 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 C7orf31Q8N865 590 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TDRD5Q8NAT2 981 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ANKRD52Q8NB46 1076 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 KYQ8NBH2 561 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 APPL2Q8NEU8 664 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PPHLN1Q8NEY8 458 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 ADCY4Q8NFM4 1077 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RP9Q8TA86 221 aaKnown RBP3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 MIPOL1Q8TD10 442 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 RNF139Q8WU17 664 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 PYDC1Q8WXC3 89 aa3.41□□□□□ -1.86
HMGN1P18-201ENST00000457642 CENPIQ92674 756 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms