RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.14□□□□□ -0.95
PKP4-207ENST00000457109 SPAG17Q6Q759 2223 aa9.14□□□□□ -0.95
PKP4-207ENST00000457109 CNOT1A5YKK6 2376 aaKnown RBP9.14□□□□□ -0.95
PKP4-207ENST00000457109 PTPRDP23468 1912 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 HELZP42694 1942 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 EDDM13A0A1B0GTR0 161 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 BIN1O00499 593 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 TNFSF14O43557 240 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 LUC7L3O95232 432 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 IGLV3-27P01718 113 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 ZNF18P17022 549 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 GNA15P30679 374 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 SLC6A4P31645 630 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 SLC8A1P32418 973 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 CSKP41240 450 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 GPD2P43304 727 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 STX17P56962 302 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 RPS24P62847 133 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 RACK1P63244 317 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 CCDC15Q0P6D6 951 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 PTPRNQ16849 979 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 KIF19Q2TAC6 998 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 HNRNPA1L2Q32P51 320 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 ACCSLQ4AC99 568 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 MS4A13Q5J8X5 152 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 PITRM1Q5JRX3 1037 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 EFHC1Q5JVL4 640 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 KIAA0895LQ68EN5 471 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 FOXR2Q6PJQ5 311 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 SND1Q7KZF4 910 aaKnown RBP eCLIP9.13□□□□□ -0.959e-9■□□□□ 8.6
PKP4-207ENST00000457109 BEND5Q7L4P6 421 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 MMAAQ8IVH4 418 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 DHX40Q8IX18 779 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 CFAP52Q8N1V2 620 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 UBR7Q8N806 425 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 OR2T34Q8NGX1 318 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 ADAM32Q8TC27 787 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 DQX1Q8TE96 717 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 CLEC4CQ8WTT0 213 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 ZNF606Q8WXB4 792 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 P2RY11Q96G91 374 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 BTN2A3PQ96KV6 586 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 INTS2Q9H0H0 1204 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 RSPH9Q9H1X1 276 aaPredicted RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 PDCL3Q9H2J4 239 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 PABPC3Q9H361 631 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 SYNCQ9H7C4 482 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 FAM204AQ9H8W3 233 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 IL21RQ9HBE5 538 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 TM9SF3Q9HD45 589 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 ERVW-1Q9UQF0 538 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 FNDC3AQ9Y2H6 1198 aaKnown RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 FARP1Q9Y4F1 1045 aaPredicted RBP9.13□□□□□ -0.95
PKP4-207ENST00000457109 SNX11Q9Y5W9 270 aa9.13□□□□□ -0.95
PKP4-207ENST00000457109 SYNJ2BP-COX16A0A087WUM0 186 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3DA0A087WVF3 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3IA0A087WXS9 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3EA0A087X179 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3KA0A087X1G2 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3FA6NER0 549 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3LB9A6J9 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 MAGEC1O60732 1142 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 SIN3BO75182 1162 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TRUB2O95900 331 aaKnown RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 ADH1BP00325 375 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 IL1BP01584 269 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 ITGAVP06756 1048 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3HP0C7X1 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 CD44P16070 742 aaKnown RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 TACR2P21452 398 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 CCR1P32246 355 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 KRT9P35527 623 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 ARRB1P49407 418 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 SGSHP51688 502 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 PTK2Q05397 1052 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 SCAPQ12770 1279 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 ZNF177Q13360 481 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 MORC3Q14149 939 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 CST6Q15828 149 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 MEA1Q16626 185 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 DCAF6Q58WW2 860 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 FAM133BQ5BKY9 247 aaKnown RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 TTC39BQ5VTQ0 682 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 FAM46CQ5VWP2 391 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 RAP1GAP2Q684P5 730 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3GQ6DHY5 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3CQ6IPX1 549 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 DENND1BQ6P3S1 775 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 CCNI2Q6ZMN8 369 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 PRPF39Q86UA1 669 aaKnown RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 ARHGEF19Q8IW93 802 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 TBC1D3Q8IZP1 549 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 OR14C36Q8NHC7 312 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 KAT5Q92993 513 aa9.12□□□□□ -0.95
PKP4-207ENST00000457109 FCRL2Q96LA5 508 aaPredicted RBP9.12□□□□□ -0.95
PKP4-207ENST00000457109 NUCKS1Q9H1E3 243 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms