RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 RIMS2Q9UQ26 1411 aa5.65□□□□□ -1.51
VPS41-209ENST00000457055 C1orf167Q5SNV9 1468 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 CCDC18Q5T9S5 1454 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 TRPM2O94759 1503 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 LRRD1A4D1F6 860 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 LCHNA4D1U4 455 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 OR6C74A6NCV1 312 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 AGRPO00253 132 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 NEMP1O14524 444 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 NPC1O15118 1278 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 ACSL4O60488 711 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 CIDEAO60543 219 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 ZC3H11AO75152 810 aaKnown RBP eCLIP5.64□□□□□ -1.51
VPS41-209ENST00000457055 CRTAPO75718 401 aaPredicted RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 PRKD3O94806 890 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 IFNB1P01574 187 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 HRGP04196 525 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 QDPRP09417 244 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 TMIGD3P0DMS9 266 aaPredicted RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 CKMT1AP12532 417 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 PORP16435 677 aaPredicted RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 PRKACBP22694 351 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 AXLP30530 894 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 TECP42680 631 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 SELENOPP49908 381 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 SCNN1GP51170 649 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 NR1H2P55055 460 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 YBEYP58557 167 aaPredicted RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 RNASELQ05823 741 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 CBX3Q13185 183 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 RIPK1Q13546 671 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 EFR3AQ14156 821 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 GPR162Q16538 588 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 AAK1Q2M2I8 961 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 TMEM266Q2M3C6 531 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 SLC39A12Q504Y0 691 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 IQSEC1Q6DN90 963 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 ERICH5Q6P6B1 374 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 CLEC2AQ6UVW9 174 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 LRIG3Q6UXM1 1119 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 PTCHD4Q6ZW05 846 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 MAMDC2Q7Z304 686 aaPredicted RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 ARHGAP22Q7Z5H3 698 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 R3HCC1LQ7Z5L2 792 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 SLFN11Q7Z7L1 901 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 ADCK1Q86TW2 530 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 PTRH1Q86Y79 214 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 GATAD2AQ86YP4 633 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 DENND6AQ8IWF6 608 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 TRIM48Q8IWZ4 208 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 CDH26Q8IXH8 852 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 TTC5Q8N0Z6 440 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 ZNF565Q8N9K5 539 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 DNAAF3Q8N9W5 541 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 PIP4K2CQ8TBX8 421 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 PIGOQ8TEQ8 1089 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 CACTINQ8WUQ7 758 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 KIFAP3Q92845 792 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 PTP4A1Q93096 173 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 MSANTD3Q96H12 275 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 PTPN18Q99952 460 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 NUSAP1Q9BXS6 441 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 CARD9Q9H257 536 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 DPH5Q9H2P9 285 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 CDIP1Q9H305 208 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 WDR6Q9NNW5 1121 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 A1CFQ9NQ94 594 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 DLL4Q9NR61 685 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 ATAD3AQ9NVI7 634 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 GDAP2Q9NXN4 497 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 TUBGCP4Q9UGJ1 667 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 KIAA1257Q9ULG3 409 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 DDX19BQ9UMR2 479 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 APOBEC2Q9Y235 224 aaKnown RBP5.64□□□□□ -1.51
VPS41-209ENST00000457055 POLHQ9Y253 713 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 CFL2Q9Y281 166 aa5.64□□□□□ -1.51
VPS41-209ENST00000457055 NCF1BA6NI72 391 aaPredicted RBP5.63□□□□□ -1.51
VPS41-209ENST00000457055 NCF1CA8MVU1 366 aaPredicted RBP5.63□□□□□ -1.51
VPS41-209ENST00000457055 GOLGA8MH3BSY2 632 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 SCAMP1O15126 338 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 HDAC3O15379 428 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 SYNCRIPO60506 623 aaKnown RBP5.63□□□□□ -1.51
VPS41-209ENST00000457055 UBL4AP11441 157 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 CDK4P11802 303 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 CHMP24386 653 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 ADSSP30520 456 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 CCT6AP40227 531 aaKnown RBP5.63□□□□□ -1.51
VPS41-209ENST00000457055 GRIA2P42262 883 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 ID4P47928 161 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 STAT5BP51692 787 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 HMGA2P52926 109 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 MAPK10P53779 464 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 CARD18P57730 90 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 PPP2R2AP63151 447 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 YWHAHQ04917 246 aaPredicted RBP5.63□□□□□ -1.51
VPS41-209ENST00000457055 GRIN1Q05586 938 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 C17orf67Q0P5P2 114 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 ASPHQ12797 758 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 MAP4K2Q12851 820 aa5.63□□□□□ -1.51
VPS41-209ENST00000457055 LRMPQ12912 555 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms