RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	USP10	Q14694	798 aa	Known RBP	4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	NAB2	Q15742	525 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	RAB30	Q15771	203 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	ZACN	Q401N2	412 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	SV2C	Q496J9	727 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	FILIP1L	Q4L180	1135 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	ZMAT1	Q5H9K5	638 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	EMC4	Q5J8M3	183 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	FKBP15	Q5T1M5	1219 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	C9orf57	Q5W0N0	161 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	KRT39	Q6A163	491 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	FUT10	Q6P4F1	479 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	TUBA3E	Q6PEY2	450 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	KCNT2	Q6UVM3	1135 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	ALKAL1	Q6UXT8	129 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	DSTYK	Q6XUX3	929 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	TRAPPC11	Q7Z392	1133 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	NT5DC4	Q86YG4	428 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	CCDC150	Q8NCX0	1101 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	BVES	Q8NE79	360 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	FBXL13	Q8NEE6	735 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	TMEM174	Q8WUU8	243 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	ARNTL2	Q8WYA1	636 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	RSPH1	Q8WYR4	309 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	SEMA4D	Q92854	862 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	ZNF689	Q96CS4	500 aa	Predicted RBP	4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	HPDL	Q96IR7	371 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	B3GALT6	Q96L58	329 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	UROC1	Q96N76	676 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	MMS19	Q96T76	1030 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	INTS2	Q9H0H0	1204 aa	Known RBP	4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	NDST4	Q9H3R1	872 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	SMOC1	Q9H4F8	434 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	CWH43	Q9H720	699 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	IFNK	Q9P0W0	207 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	ADAM28	Q9UKQ2	775 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	MYH10	P35580	1976 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	MYO9B	Q13459	2157 aa		4.98	□□□□□ -1.61
COL21A1-204	ENST00000456983	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	GOLGA6L3	A6NEY3	463 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	EPOP	A6NHQ4	379 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	NRP1	O14786	923 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	RAMP2	O60895	175 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TADA2A	O75478	443 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	FGF18	O76093	207 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	C4BPA	P04003	597 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	UROD	P06132	367 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TPM3	P06753	285 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	GALT	P07902	379 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	LINC00271	P0C7V0	271 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	ODC1	P11926	461 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	CD58	P19256	250 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	CYP3A5	P20815	502 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	ACO1	P21399	889 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TKT	P29401	623 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	LRPAP1	P30533	357 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	GTF2H1	P32780	548 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	PNPLA4	P41247	253 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	ALDH7A1	P49419	539 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	AP3M2	P53677	418 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	UBASH3A	P57075	661 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	RBP5	P82980	135 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	SMAD3	P84022	425 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	POU5F1	Q01860	360 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	HHEX	Q03014	270 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TAP1	Q03518	808 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	RAPGEF1	Q13905	1077 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	SYCP1	Q15431	976 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	UPP1	Q16831	310 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	EXOC3L4	Q17RC7	722 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	EPC2	Q52LR7	807 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	ZNF667	Q5HYK9	610 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	AGBL4	Q5VU57	503 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	PLPP4	Q5VZY2	271 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	GJB7	Q6PEY0	223 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TRIM65	Q6PJ69	517 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	GBP6	Q6ZN66	633 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	C15orf39	Q6ZRI6	1047 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	APTX	Q7Z2E3	356 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	CEP57	Q86XR8	500 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	ARHGEF19	Q8IW93	802 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	ADGRF2	Q8IZF7	708 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	SLC39A11	Q8N1S5	342 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	PPM1K	Q8N3J5	372 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	LRRC52	Q8N7C0	313 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	EXTL1	Q92935	676 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	KAT5	Q92993	513 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	NEIL1	Q96FI4	390 aa	Predicted RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	IGSF21	Q96ID5	467 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TGS1	Q96RS0	853 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TMEM175	Q9BSA9	504 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	HERC2P3	Q9BVR0	1158 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	TRIM5	Q9C035	493 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	XPO4	Q9C0E2	1151 aa	Known RBP	4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	PRO3102	Q9H379	93 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	EPB41L1	Q9H4G0	881 aa		4.97	□□□□□ -1.61
COL21A1-204	ENST00000456983	SLC28A3	Q9HAS3	691 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms