RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 ALS2CLQ60I27 953 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 HOOK3Q86VS8 718 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 NLRP14Q86W24 1093 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 RELL1Q8IUW5 271 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 IQCKQ8N0W5 287 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 RTL3Q8N8U3 475 aaKnown RBP16.62■□□□□ 0.25
TMEM220-202ENST00000455996 HTR3CQ8WXA8 447 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 HDAC11Q96DB2 347 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 KLF16Q9BXK1 252 aaPredicted RBP16.62■□□□□ 0.25
TMEM220-202ENST00000455996 PRDM12Q9H4Q4 367 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 RETREG1Q9H6L5 497 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 MAP3K6O95382 1288 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 SRGAP2BP0DMP2 458 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 RHOQP17081 205 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 PFKLP17858 780 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 HOXA9P31269 272 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 DHX9Q08211 1270 aaKnown RBP16.62■□□□□ 0.25
TMEM220-202ENST00000455996 PPIDQ08752 370 aaKnown RBP16.62■□□□□ 0.25
TMEM220-202ENST00000455996 RWDD4Q6NW29 188 aaKnown RBP16.62■□□□□ 0.25
TMEM220-202ENST00000455996 LRRC31Q6UY01 552 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 CEP128Q6ZU80 1094 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 B4GALNT4Q76KP1 1039 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 ARHGAP12Q8IWW6 846 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 PPIL6Q8IXY8 311 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 ZCCHC9Q8N567 271 aaKnown RBP16.62■□□□□ 0.25
TMEM220-202ENST00000455996 NAT8LQ8N9F0 302 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 SLC22A17Q8WUG5 538 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 CPT1BQ92523 772 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 TSGA13Q96PP4 275 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 LGMNQ99538 433 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 PHACTR1Q9C0D0 580 aa16.62■□□□□ 0.25
TMEM220-202ENST00000455996 YBX2Q9Y2T7 364 aaKnown RBP16.62■□□□□ 0.25
TMEM220-202ENST00000455996 C2orf78A6NCI8 922 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 MTSS1O43312 755 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 CLASP2O75122 1294 aaKnown RBP16.61■□□□□ 0.25
TMEM220-202ENST00000455996 POU2F2P09086 479 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 IRS1P35568 1242 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 GARSP41250 739 aaKnown RBP16.61■□□□□ 0.25
TMEM220-202ENST00000455996 KCNQ1P51787 676 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 EPHA5P54756 1037 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 UAP1Q16222 522 aaPredicted RBP16.61■□□□□ 0.25
TMEM220-202ENST00000455996 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
TMEM220-202ENST00000455996 NADSYN1Q6IA69 706 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 GAREM2Q75VX8 874 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 LRRC49Q8IUZ0 686 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 TP53INP2Q8IXH6 220 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 UMODL1-AS1Q8N2C9 162 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 ELMOD1Q8N336 334 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
TMEM220-202ENST00000455996 P2RY11Q96G91 374 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 ZFRQ96KR1 1074 aaKnown RBP16.61■□□□□ 0.25
TMEM220-202ENST00000455996 ZYG11BQ9C0D3 744 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 NACA2Q9H009 215 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 RNF38Q9H0F5 515 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 ACBD3Q9H3P7 528 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 TMEM248Q9NWD8 314 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 DONSONQ9NYP3 566 aa16.61■□□□□ 0.25
TMEM220-202ENST00000455996 A0A0A0MRY4 1105 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 ACSL4O60488 711 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 STC2O76061 302 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 LATS1O95835 1130 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 HMBSP08397 361 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 ACTN2P35609 894 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 CHKAP35790 457 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 HSD17B3P37058 310 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
TMEM220-202ENST00000455996 NRLP54845 237 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 WASHC5Q12768 1159 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 GPM6BQ13491 265 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 KCNJ11Q14654 390 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 PPM1LQ5SGD2 360 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 FBXL22Q6P050 247 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 SPATA13Q96N96 652 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 GDF15Q99988 308 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 FERMT1Q9BQL6 677 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 EPB41L4BQ9H329 900 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 ZNF212Q9UDV6 495 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 STOML2Q9UJZ1 356 aa16.6■□□□□ 0.25
TMEM220-202ENST00000455996 CCDC85CA6NKD9 419 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 CHADO15335 359 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 OPHN1O60890 802 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 PAPLNO95428 1278 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 FGF19O95750 216 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 HNRNPA1P09651 372 aaKnown RBP eCLIP16.59■□□□□ 0.25
TMEM220-202ENST00000455996 TACR2P21452 398 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 CDC25CP30307 473 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 SLC11A2P49281 568 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 PMS2P54278 862 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 FAM133BQ5BKY9 247 aaKnown RBP16.59■□□□□ 0.25
TMEM220-202ENST00000455996 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
TMEM220-202ENST00000455996 RAP1GAP2Q684P5 730 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 LRIG3Q6UXM1 1119 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 TRMT10CQ7L0Y3 403 aaKnown RBP16.59■□□□□ 0.25
TMEM220-202ENST00000455996 CCDC33Q8N5R6 958 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 MICAL1Q8TDZ2 1067 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 FATE1Q969F0 183 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 IGSF8Q969P0 613 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 LMAN2LQ9H0V9 348 aa16.59■□□□□ 0.25
TMEM220-202ENST00000455996 PABPC3Q9H361 631 aaKnown RBP16.59■□□□□ 0.25
TMEM220-202ENST00000455996 VANGL2Q9ULK5 521 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms