RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SLC5A2P31639 672 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 ETFBP38117 255 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 PMS1P54277 932 aaKnown RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 POU5F1BQ06416 359 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 SART3Q15020 963 aaKnown RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 DHCR24Q15392 516 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 PPP2R5EQ16537 467 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 ZC2HC1CQ53FD0 456 aaPredicted RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 XKR3Q5GH77 459 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 UNC5AQ6ZN44 842 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 TRMT11Q7Z4G4 463 aaKnown RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 C14orf80Q86SX3 495 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 ITIH5Q86UX2 942 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 VASH2Q86V25 355 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 DTX1Q86Y01 620 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 ARL14Q8N4G2 192 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 ARL14EPQ8N8R7 260 aaPredicted RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 C9orf43Q8TAL5 461 aaPredicted RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 PIBF1Q8WXW3 757 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 TMEM143Q96AN5 459 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 P2RY11Q96G91 374 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 HEXIM2Q96MH2 286 aaKnown RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 KREMEN1Q96MU8 473 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 UROC1Q96N76 676 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 NUP58Q9BVL2 599 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 TRIM6Q9C030 488 aaPredicted RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 C6orf106Q9H6K1 298 aaPredicted RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 DHX33Q9H6R0 707 aaKnown RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 ACTR10Q9NZ32 417 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 GCNT4Q9P109 453 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 SUCOQ9UBS9 1254 aaKnown RBP5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 RNF112Q9ULX5 631 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 PHTF1Q9UMS5 762 aa5.66□□□□□ -1.5
SBDSP1-204ENST00000453858 RP1P56715 2156 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 LY6G6EA0A0G2JKS1 128 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 A0A1B0GVM2 712 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 SCO2A0A1W2PP80 73 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 HEATR9A2RTY3 570 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 MTMR11A4FU01 709 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 TBC1D3BA6NDS4 549 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 TCP11X1B4DZS4 312 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 WASH3PC4AMC7 463 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 K7EM74 188 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 SMAD7O15105 426 aaKnown RBP5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 TADA3O75528 432 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 ERLIN2O94905 339 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 GIMD1P0DJR0 217 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 CKMT1AP12532 417 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 ABCB4P21439 1286 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 CD27P26842 260 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 KRTAP10-9P60411 292 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 RPL10AP62906 217 aaKnown RBP5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 MRPL49Q13405 166 aaKnown RBP5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 LRP8Q14114 963 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 FXNQ16595 210 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 XKR4Q5GH76 650 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 ZNF280DQ6N043 979 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 ALKAL1Q6UXT8 129 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 PLA2G4DQ86XP0 818 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 SLC25A45Q8N413 288 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 KIAA1958Q8N8K9 716 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 RNF149Q8NC42 400 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 SH3RF2Q8TEC5 729 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 HPS3Q969F9 1004 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 LENG9Q96B70 501 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 BIRC7Q96CA5 298 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 ZNF577Q9BSK1 485 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 RAD54BQ9Y620 910 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 U3KQA8 63 aa5.65□□□□□ -1.5
SBDSP1-204ENST00000453858 MGAM2Q2M2H8 2515 aa5.65□□□□□ -1.51
SBDSP1-204ENST00000453858 TRIP11Q15643 1979 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 CROCCQ5TZA2 2017 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 KRTAP9-6A0A140TA67 174 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 SMIM28A0A1B0GU29 152 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 A0A1W2PR77 199 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 WNT9AO14904 365 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 TRIM24O15164 1050 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 IPO8O15397 1037 aaKnown RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 YKT6O15498 198 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 ASAP2O43150 1006 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 EDIL3O43854 480 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 PRICKLE3O43900 615 aaPredicted RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 GP1BAP07359 652 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 CYP3A4P08684 503 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 NAT2P11245 290 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 CD1EP15812 388 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 TGM2P21980 687 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 HDAC4P56524 1084 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 KDSRQ06136 332 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 INF2Q27J81 1249 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 SKOR2Q2VWA4 1001 aaPredicted RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 FUT11Q495W5 492 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 IFIT1BQ5T764 474 aaKnown RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 B3GNT9Q6UX72 402 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 KIAA1324Q6UXG2 1013 aaKnown RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 FAM169BQ8N8A8 192 aa5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 ENOX1Q8TC92 643 aaKnown RBP5.64□□□□□ -1.51
SBDSP1-204ENST00000453858 CPT1CQ8TCG5 803 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms