RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 NDUFA10O95299 355 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 METTL18O95568 372 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 CLTBP09497 229 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 ACO1P21399 889 aaKnown RBP4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 CNR2P34972 360 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 PBX3P40426 434 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 GPD2P43304 727 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 MTNR1AP48039 350 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 DIO1P49895 249 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 AGTR2P50052 363 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 GPC5P78333 572 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 ARHGAP8P85298 464 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 E2F1Q01094 437 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 TMEM115Q12893 351 aaPredicted RBP4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 TOB2Q14106 344 aaPredicted RBP4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 IRF3Q14653 427 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 FBXO43Q4G163 708 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 TCERG1LQ5VWI1 586 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 WDR93Q6P2C0 686 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 VWA1Q6PCB0 445 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 KLHL24Q6TFL4 600 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 MTHFD1LQ6UB35 978 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 KRT74Q7RTS7 529 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 GPR149Q86SP6 731 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 TMPRSS6Q8IU80 811 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 SCN4BQ8IWT1 228 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 PNPLA1Q8N8W4 532 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 CPEB3Q8NE35 698 aaKnown RBP4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 SSH3Q8TE77 659 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 C2CD4CQ8TF44 421 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 KCNJ9Q92806 393 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 RFKQ969G6 155 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 FKBP10Q96AY3 582 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 EDC3Q96F86 508 aaKnown RBP4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 TTC14Q96N46 770 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 YME1L1Q96TA2 773 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 CD180Q99467 661 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 GLIS2Q9BZE0 524 aaPredicted RBP4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 SCPEP1Q9HB40 452 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 ABHD10Q9NUJ1 306 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 SEMA5BQ9P283 1151 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 MGAT4CQ9UBM8 478 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 HSPB7Q9UBY9 170 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 B3GNT3Q9Y2A9 372 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 LYVE1Q9Y5Y7 322 aa4.55□□□□□ -1.68
HMGN3P1-201ENST00000453847 GAGE12BA1L429 117 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 GAGE12HA6NDE8 117 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 RNASET2O00584 256 aaKnown RBP4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 ZNF213O14771 459 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 PER2O15055 1255 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 SUV39H1O43463 412 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 PROM1O43490 865 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 NUAK1O60285 661 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 LPXNO60711 386 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 SPDEFO95238 335 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 OR2C1O95371 312 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 RPN1P04843 607 aaKnown RBP4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 SPARCP09486 303 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 COX7A2P14406 83 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 HIBADHP31937 336 aaKnown RBP4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 ABCD1P33897 745 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 BSGP35613 385 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 DPP6P42658 865 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 HHEXQ03014 270 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 SEMA3AQ14563 771 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 RABL3Q5HYI8 236 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 TTI2Q6NXR4 508 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 CYP20A1Q6UW02 462 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 C17orf99Q6UX52 265 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 DENND5BQ6ZUT9 1274 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 PTCHD4Q6ZW05 846 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 SCML4Q8N228 414 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 LNX2Q8N448 690 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 TTC30BQ8N4P2 665 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 SRBD1Q8N5C6 995 aaKnown RBP4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 B3GALNT2Q8NCR0 500 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 MAFAQ8NHW3 353 aaPredicted RBP4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 XAGE5Q8WWM1 108 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 RAB40AQ8WXH6 277 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 KIF1BPQ96EK5 621 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 LOXL4Q96JB6 756 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 VPS50Q96JG6 964 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 WDFY2Q96P53 400 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 HEMGNQ9BXL5 484 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 FTOQ9C0B1 505 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 EPHX3Q9H6B9 360 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 ALKBH4Q9NXW9 302 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 ADAM18Q9Y3Q7 739 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 NOX1Q9Y5S8 564 aa4.54□□□□□ -1.68
HMGN3P1-201ENST00000453847 A0A1W2PQF6 199 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 FRMD3A2A2Y4 597 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 UNC119BA6NIH7 251 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 PSMD9O00233 223 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 SH2B2O14492 632 aaPredicted RBP4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 FAM20BO75063 409 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 CDKL5O76039 1030 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 PLATP00750 562 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 COMTP21964 271 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 NFKBIAP25963 317 aa4.53□□□□□ -1.68
HMGN3P1-201ENST00000453847 UBA7P41226 1012 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms