RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DYDC1Q8WWB3 177 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 PSMG2Q969U7 264 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 TIFAQ96CG3 184 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 TBC1D31Q96DN5 1066 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 PGAP3Q96FM1 320 aaPredicted RBP16.36■□□□□ 0.21
SNX17-204ENST00000453453 MYRFLQ96LU7 910 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 SEMA4AQ9H3S1 761 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 SMOC2Q9H3U7 446 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 TXLNGQ9NUQ3 528 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 TRPM5Q9NZQ8 1165 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 LRRD1A4D1F6 860 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 NEBLO76041 1014 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 PYGMP11217 842 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 TFE3P19532 575 aaPredicted RBP16.35■□□□□ 0.21
SNX17-204ENST00000453453 AIF1P55008 147 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 CALCOCO2Q13137 446 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 ARL13BQ3SXY8 428 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 FAM133BQ5BKY9 247 aaKnown RBP16.35■□□□□ 0.21
SNX17-204ENST00000453453 MSANTD2Q6P1R3 559 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 TAC4Q86UU9 113 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 EXOC3L1Q86VI1 746 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 MAP7D3Q8IWC1 876 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 RIBC1Q8N443 379 aaPredicted RBP16.35■□□□□ 0.21
SNX17-204ENST00000453453 KCTD6Q8NC69 237 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 ADAM32Q8TC27 787 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 HSPH1Q92598 858 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 RNF34Q969K3 372 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 SERPINB11Q96P15 392 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 LRRC19Q9H756 370 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 NMUR1Q9HB89 426 aa16.35■□□□□ 0.21
SNX17-204ENST00000453453 MDM4O15151 490 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 CLASP2O75122 1294 aaKnown RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 SMNDC1O75940 238 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■■■■□ 26.7
SNX17-204ENST00000453453 ZDHHC11BP0C7U3 371 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 HMGA1P17096 107 aaKnown RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 PAX7P23759 505 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 IL1R2P27930 398 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 MSH2P43246 934 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 BLMHQ13867 455 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 KRT81Q14533 505 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 SMTNL2Q2TAL5 461 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 OTUD1Q5VV17 481 aaPredicted RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 CCDC137Q6PK04 289 aaKnown RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 BNIPLQ7Z465 357 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 DNAJB7Q7Z6W7 309 aaPredicted RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 FAM131BQ86XD5 332 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 EPS8L3Q8TE67 593 aaKnown RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 GDPD5Q8WTR4 605 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 PPP2R3CQ969Q6 453 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 MAGEB18Q96M61 343 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 MAN1C1Q9NR34 630 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 KLHL11Q9NVR0 708 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNX17-204ENST00000453453 ITIH2P19823 946 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 PITX1P78337 314 aaPredicted RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 PDK2Q15119 407 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 ATP13A4Q4VNC1 1196 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 PABPC1LQ4VXU2 614 aaKnown RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 KCNT1Q5JUK3 1230 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 C10orf120Q5SQS8 335 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 TXNRD3NBQ6F5E7 133 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 PPP1R21Q6ZMI0 780 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 SLC13A5Q86YT5 568 aaPredicted RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 PSTKQ8IV42 348 aaKnown RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 AGGF1Q8N302 714 aaeCLIP16.34■□□□□ 0.21
SNX17-204ENST00000453453 TMEM237Q96Q45 408 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 PEBP4Q96S96 227 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 SNRNP25Q9BV90 132 aaKnown RBP16.34■□□□□ 0.21
SNX17-204ENST00000453453 FOXP3Q9BZS1 431 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 NACA2Q9H009 215 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 PIGVQ9NUD9 493 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNX17-204ENST00000453453 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
SNX17-204ENST00000453453 ATG2AQ2TAZ0 1938 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 PI4K2BG5E9Z4 385 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 IRAK2O43187 625 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 ECEL1O95672 775 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 RPSAP08865 295 aaKnown RBP16.33■□□□□ 0.2
SNX17-204ENST00000453453 ATXN1P54253 815 aaKnown RBP16.33■□□□□ 0.2
SNX17-204ENST00000453453 CDH6P55285 790 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 KCNJ2P63252 427 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 RAB6CQ53S08 254 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 EFHC2Q5JST6 749 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 SNX30Q5VWJ9 437 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 RHBDF2Q6PJF5 856 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 ARHGEF18Q6ZSZ5 1173 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 ZNF276Q8N554 614 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 CMASQ8NFW8 434 aaPredicted RBP16.33■□□□□ 0.2
SNX17-204ENST00000453453 ARHGEF2Q92974 986 aaKnown RBP16.33■□□□□ 0.2
SNX17-204ENST00000453453 NTAN1Q96AB6 310 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 ACSF2Q96CM8 615 aaPredicted RBP16.33■□□□□ 0.2
SNX17-204ENST00000453453 ZNF570Q96NI8 536 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 GCNAQ96QF7 691 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 ADAM33Q9BZ11 813 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 RAB6CQ9H0N0 254 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 WDCPQ9H6R7 721 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 TLE6Q9H808 572 aa16.33■□□□□ 0.2
SNX17-204ENST00000453453 OSER1Q9NX31 292 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms