RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 TTC16Q8NEE8 873 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 RIN3Q8TB24 985 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF564Q8TBZ8 553 aaPredicted RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 FAM172AQ8WUF8 416 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 UBE2Q2Q8WVN8 375 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 HAPLN3Q96S86 360 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 IER2Q9BTL4 223 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 NUP85Q9BW27 656 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 COL25A1Q9BXS0 654 aaPredicted RBP9.02□□□□□ -0.97
COL28A1-205ENST00000453441 SLC2A11Q9BYW1 496 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 OSBPL6Q9BZF3 934 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 TKTL2Q9H0I9 626 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 EBF3Q9H4W6 596 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 HPS4Q9NQG7 708 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 PIGVQ9NUD9 493 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 SPTLC3Q9NUV7 552 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 CTTNBP2NLQ9P2B4 639 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 MYO1AQ9UBC5 1043 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 PIAS3Q9Y6X2 628 aa9.02□□□□□ -0.97
COL28A1-205ENST00000453441 SOWAHDA6NJG2 315 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 BTNL10A8MVZ5 291 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 F5H5T6 163 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 SPECC1L-ADORA2AF8WAN1 911 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 GFRA2O00451 464 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 NCAM2O15394 837 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 SPINT1O43278 529 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 CCP110O43303 1012 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 CACNG3O60359 315 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 PENKP01210 267 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-205ENST00000453441 ARSAP15289 507 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 DRD1P21728 446 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 MAN1A1P33908 653 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 GJA4P35212 333 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 OXCT1P55809 520 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 HDAC4P56524 1084 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 ATP11AP98196 1134 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 NRG1Q02297 640 aaPredicted RBP9.01□□□□□ -0.97
COL28A1-205ENST00000453441 IFI16Q16666 785 aaKnown RBP9.01□□□□□ -0.97
COL28A1-205ENST00000453441 LY6G5CQ5SRR4 150 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 TRNP1Q6NT89 227 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 RHBDF2Q6PJF5 856 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 LRRC31Q6UY01 552 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 ZNF852Q6ZMS4 543 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 BMP8AQ7Z5Y6 402 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 PHLDB2Q86SQ0 1253 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 TMEM139Q8IV31 216 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 LRRC8AQ8IWT6 810 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 ASIC4Q96FT7 647 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 PDLIM2Q96JY6 352 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 ZFYVE19Q96K21 471 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 PPP1R9BQ96SB3 815 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 BBS2Q9BXC9 721 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 OSBPL2Q9H1P3 480 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 LINC00597Q9H2U6 94 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 DONSONQ9NYP3 566 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 ANAPC7Q9UJX3 599 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 PCDHA13Q9Y5I0 950 aa9.01□□□□□ -0.97
COL28A1-205ENST00000453441 TECTAO75443 2155 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 A0A0C4DFX4 3053 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 SYNJ2BP-COX16A0A087WUM0 186 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 KANSL1LA0AUZ9 987 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 TRDMT1O14717 391 aaKnown RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 PJA2O43164 708 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 PRPSAP2O60256 369 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 PAGE1O75459 146 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 PROSCO94903 275 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 MOCS2O96007 188 aaPredicted RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 TACR2P21452 398 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 ADRA1BP35368 520 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 SOX11P35716 441 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 SLC1A1P43005 524 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 VAV2P52735 878 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 PITX1P78337 314 aaPredicted RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 TNK2Q07912 1038 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 CCDC173Q0VFZ6 552 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 KIF5AQ12840 1032 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 GRSF1Q12849 480 aaKnown RBP eCLIP9□□□□□ -0.97
COL28A1-205ENST00000453441 LRRC32Q14392 662 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 HADHQ16836 314 aaKnown RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 CDO1Q16878 200 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 C15orf59Q2T9L4 293 aaPredicted RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 ANO4Q32M45 955 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 C5orf22Q49AR2 442 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 FBXO43Q4G163 708 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 BOLA3Q53S33 107 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 FAM133BQ5BKY9 247 aaKnown RBP9□□□□□ -0.97
COL28A1-205ENST00000453441 MS4A13Q5J8X5 152 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 EFHC2Q5JST6 749 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 DGKKQ5KSL6 1271 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 PIK3R6Q5UE93 754 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 RNF43Q68DV7 783 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 TRIM68Q6AZZ1 485 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 TREML4Q6UXN2 200 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 RAD9BQ6WBX8 426 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 TPRG1Q6ZUI0 275 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 CHST9Q7L1S5 443 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 SLFN11Q7Z7L1 901 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 KIAA1328Q86T90 577 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 CHSY1Q86X52 802 aa9□□□□□ -0.97
COL28A1-205ENST00000453441 SIX5Q8N196 739 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms