RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 CC2D1AQ6P1N0 951 aaPredicted RBP16.22■□□□□ 0.19
VCX3B-204ENST00000453306 Q6ZS52 159 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 KIAA1328Q86T90 577 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 WDR5BQ86VZ2 330 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 FAM217AQ8IXS0 508 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 ZNF683Q8IZ20 524 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 NIPA2Q8N8Q9 360 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 TPCN2Q8NHX9 752 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 TKTL2Q9H0I9 626 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 SEMA4GQ9NTN9 838 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.22■□□□□ 0.19
VCX3B-204ENST00000453306 IP6K2Q9UHH9 426 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 STOML2Q9UJZ1 356 aa16.22■□□□□ 0.19
VCX3B-204ENST00000453306 NUP210Q8TEM1 1887 aaPredicted RBP16.22■□□□□ 0.19
VCX3B-204ENST00000453306 F5P12259 2224 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 USP27XA6NNY8 438 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 TMEM110-MUSTN1A8MSY1 372 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 FAM72CH0Y354 149 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 MYO1FO00160 1098 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 ACSL4O60488 711 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 PAGE1O75459 146 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 MOCS2O96007 188 aaPredicted RBP16.21■□□□□ 0.19
VCX3B-204ENST00000453306 F9P00740 461 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 GBP1P32455 592 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 ADRA1BP35368 520 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 IRAK1P51617 712 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 DMWDQ09019 674 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 RUNX3Q13761 415 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 MESDQ14696 234 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 ATP13A4Q4VNC1 1196 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 FAM72AQ5TYM5 149 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 NAIF1Q69YI7 327 aaPredicted RBP16.21■□□□□ 0.19
VCX3B-204ENST00000453306 FAM72DQ6L9T8 149 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 RHBDF2Q6PJF5 856 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 PRR23CQ6ZRP0 262 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 FAM72BQ86X60 149 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 TMEM25Q86YD3 366 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 RHOT2Q8IXI1 618 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 PYROXD2Q8N2H3 581 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 OSCP1Q8WVF1 389 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 EBF3Q9H4W6 596 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 WDCPQ9H6R7 721 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 GPATCH2LQ9NWQ4 482 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 DUS2Q9NX74 493 aaKnown RBP16.21■□□□□ 0.19
VCX3B-204ENST00000453306 PCSK1NQ9UHG2 260 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 SH3BP1Q9Y3L3 701 aa16.21■□□□□ 0.19
VCX3B-204ENST00000453306 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.21■□□□□ 0.19
VCX3B-204ENST00000453306 GPR179Q6PRD1 2367 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 CCDC163A0A0D9SF12 145 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.2■□□□□ 0.18
VCX3B-204ENST00000453306 DCDC2BA2VCK2 349 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 GRID2IPA4D2P6 1211 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 SLC30A4O14863 429 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 MOCS3O95396 460 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 CCR1P32246 355 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 NOP2P46087 812 aaKnown RBP16.2■□□□□ 0.18
VCX3B-204ENST00000453306 SLC25A11Q02978 314 aaKnown RBP16.2■□□□□ 0.18
VCX3B-204ENST00000453306 PIGHQ14442 188 aaPredicted RBP16.2■□□□□ 0.18
VCX3B-204ENST00000453306 MS4A13Q5J8X5 152 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 SCYL2Q6P3W7 929 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 RFWD3Q6PCD5 774 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 ZNF662Q6ZS27 426 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 DDX42Q86XP3 938 aaKnown RBP eCLIP16.2■□□□□ 0.18
VCX3B-204ENST00000453306 LRRC57Q8N9N7 239 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 AZIN2Q96A70 460 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 IRX2Q9BZI1 471 aaPredicted RBP16.2■□□□□ 0.18
VCX3B-204ENST00000453306 CLEC4EQ9ULY5 219 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 SLC8A2Q9UPR5 921 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 HS3ST4Q9Y661 456 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 SPTBN2O15020 2390 aa16.2■□□□□ 0.18
VCX3B-204ENST00000453306 MACROD2A1Z1Q3 448 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 TSPAN3O60637 253 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
VCX3B-204ENST00000453306 CCDC175P0C221 793 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 HARS2P49590 506 aaKnown RBP16.19■□□□□ 0.18
VCX3B-204ENST00000453306 SRSF5Q13243 272 aaKnown RBP16.19■□□□□ 0.18
VCX3B-204ENST00000453306 PDGFRLQ15198 375 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 TMEM196Q5HYL7 178 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 BRMS1LQ5PSV4 323 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 ADGRF1Q5T601 910 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 RAP1GAP2Q684P5 730 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 UNC45BQ8IWX7 931 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 C17orf53Q8N3J3 647 aaPredicted RBP16.19■□□□□ 0.18
VCX3B-204ENST00000453306 FAM160A2Q8N612 972 aaPredicted RBP16.19■□□□□ 0.18
VCX3B-204ENST00000453306 KIAA1958Q8N8K9 716 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 RNF34Q969K3 372 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 LOXL4Q96JB6 756 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 PRICKLE1Q96MT3 831 aaPredicted RBP16.19■□□□□ 0.18
VCX3B-204ENST00000453306 DCLK3Q9C098 648 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.19■□□□□ 0.18
VCX3B-204ENST00000453306 FZD10Q9ULW2 581 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 ALG6Q9Y672 507 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 CAPN6Q9Y6Q1 641 aa16.19■□□□□ 0.18
VCX3B-204ENST00000453306 ACACBO00763 2458 aa16.18■□□□□ 0.18
VCX3B-204ENST00000453306 CYP17A1P05093 508 aa16.18■□□□□ 0.18
VCX3B-204ENST00000453306 DRD1P21728 446 aa16.18■□□□□ 0.18
VCX3B-204ENST00000453306 COMTP21964 271 aa16.18■□□□□ 0.18
VCX3B-204ENST00000453306 MAN1A1P33908 653 aa16.18■□□□□ 0.18
VCX3B-204ENST00000453306 PCK1P35558 622 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms