RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 SRGAP2BP0DMP2 458 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 VAV1P15498 845 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 GJA1P17302 382 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 PTPN2P17706 415 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ITIH2P19823 946 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 TACR2P21452 398 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 EPHB2P29323 1055 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 SLC6A4P31645 630 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 STIP1P31948 543 aaKnown RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ATP5OP48047 213 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 COG7P83436 770 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 CYP4F8P98187 520 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 PRKD1Q15139 912 aaPredicted RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 RAB30Q15771 203 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 DUSP6Q16828 381 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ALFQ53S48 1182 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 SLC45A4Q5BKX6 768 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 FAM133BQ5BKY9 247 aaKnown RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 PRSS36Q5K4E3 855 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 FAM182AQ5T1J6 154 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 AFMIDQ63HM1 303 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 RAP1GAP2Q684P5 730 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 NUGGCQ68CJ6 796 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 TXNDC8Q6A555 127 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 FBXL22Q6P050 247 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 DARS2Q6PI48 645 aaKnown RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 POTEHQ6S545 545 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 TMCO3Q6UWJ1 677 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 BZW1Q7L1Q6 419 aaKnown RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 GSTA5Q7RTV2 222 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 NLRP14Q86W24 1093 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ARHGAP12Q8IWW6 846 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC33Q8N5R6 958 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ARL14EPQ8N8R7 260 aaPredicted RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC89Q8N998 374 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 FAM71DQ8N9W8 422 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ZSCAN18Q8TBC5 510 aaPredicted RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 FBXO25Q8TCJ0 367 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ARNTL2Q8WYA1 636 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 CAVIN3Q969G5 261 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 IGSF8Q969P0 613 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 PLD4Q96BZ4 506 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF707Q96C28 371 aaPredicted RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 TBC1D31Q96DN5 1066 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 QKIQ96PU8 341 aaKnown RBP eCLIP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 CORO1BQ9BR76 489 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 SLC46A2Q9BY10 475 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 FUT8Q9BYC5 575 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 TXLNGYQ9BZA5 131 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 PRO3102Q9H379 93 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 PRDM12Q9H4Q4 367 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 NOL6Q9H6R4 1146 aaKnown RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ARFGAP3Q9NP61 516 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 MAN1C1Q9NR34 630 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 NDFIP2Q9NV92 336 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 ARGLU1Q9NWB6 273 aaPredicted RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 MPP6Q9NZW5 540 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 DNMT3BQ9UBC3 853 aaKnown RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 PPARGC1AQ9UBK2 798 aaKnown RBP6.18□□□□□ -1.42
SDC4P-201ENST00000453285 SLC12A6Q9UHW9 1150 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 MSRAQ9UJ68 235 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 STOML2Q9UJZ1 356 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 VANGL2Q9ULK5 521 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 HCFC2Q9Y5Z7 792 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 RAD54BQ9Y620 910 aa6.18□□□□□ -1.42
SDC4P-201ENST00000453285 REV3LO60673 3130 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 A0A1W2PRU2 124 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CFAP69A5D8W1 941 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 C5orf60A6NFR6 353 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 GFRA2O00451 464 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 FGF10O15520 208 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 KCNN4O15554 427 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 GCATO75600 419 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 SASH3O75995 380 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CNTN5O94779 1100 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 IFNB1P01574 187 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RHOP08100 348 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 MBL2P11226 248 aaPredicted RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 MYL4P12829 197 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RHOQP17081 205 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 PFKLP17858 780 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 HDCP19113 662 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CDC25CP30307 473 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 CORO1AP31146 461 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ADCY8P40145 1251 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 VPS41P49754 854 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RGS19P49795 217 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 ITGA8P53708 1063 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 PLTPP55058 493 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 SLC7A9P82251 487 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 RBM10P98175 930 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 PPIDQ08752 370 aaKnown RBP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 GALNT2Q10471 571 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 WASHC5Q12768 1159 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 GPS1Q13098 491 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 MTA1Q13330 715 aa6.17□□□□□ -1.42
SDC4P-201ENST00000453285 HLTFQ14527 1009 aaKnown RBP eCLIP6.17□□□□□ -1.42
SDC4P-201ENST00000453285 PDK1Q15118 436 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms