RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 C10orf107Q8IVU9 208 aa19.11■□□□□ 0.65
PTPA-223ENST00000452489 MAPK15Q8TD08 544 aa19.11■□□□□ 0.65
PTPA-223ENST00000452489 PPP1R36Q96LQ0 422 aa19.11■□□□□ 0.65
PTPA-223ENST00000452489 RNPEPQ9H4A4 650 aa19.11■□□□□ 0.65
PTPA-223ENST00000452489 SEL1LQ9UBV2 794 aa19.11■□□□□ 0.65
PTPA-223ENST00000452489 CTDP1Q9Y5B0 961 aaPredicted RBP19.11■□□□□ 0.65
PTPA-223ENST00000452489 PCDHB2Q9Y5E7 798 aa19.11■□□□□ 0.65
PTPA-223ENST00000452489 CLIC3O95833 236 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 ZNF543Q08ER8 600 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 ZNF252P-AS1Q0IIN9 211 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 WDR45BQ5MNZ6 344 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 N4BP2L1Q5TBK1 243 aaPredicted RBP19.1■□□□□ 0.65
PTPA-223ENST00000452489 KCTD8Q6ZWB6 473 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 XXYLT1Q8NBI6 393 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 WDR41Q9HAD4 459 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 DDX60LQ5H9U9 1706 aaKnown RBP19.1■□□□□ 0.65
PTPA-223ENST00000452489 PSME4Q14997 1843 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 LOC105371267A0A1B0GV96 52 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 ADSLP30566 484 aaPredicted RBP19.1■□□□□ 0.65
PTPA-223ENST00000452489 PCLAFQ15004 111 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 HMBOX1Q6NT76 420 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 FAM117BQ6P1L5 589 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 MAMDC4Q6UXC1 1216 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 UTS2BQ765I0 119 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 CBWD2Q8IUF1 395 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 ACO2Q99798 780 aaKnown RBP19.1■□□□□ 0.65
PTPA-223ENST00000452489 MTG1Q9BT17 334 aaPredicted RBP19.1■□□□□ 0.65
PTPA-223ENST00000452489 STRA6Q9BX79 667 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 SNX25Q9H3E2 840 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 MRPL47Q9HD33 250 aaKnown RBP19.1■□□□□ 0.65
PTPA-223ENST00000452489 SMOXQ9NWM0 555 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 SERPINB13Q9UIV8 391 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 GPSM3Q9Y4H4 160 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 PCDHGA11Q9Y5H2 935 aa19.1■□□□□ 0.65
PTPA-223ENST00000452489 NOL3O60936 208 aaKnown RBP19.09■□□□□ 0.65
PTPA-223ENST00000452489 SERPINE1P05121 402 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 SNHG28P0DPA3 235 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 GABRB2P47870 512 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 TNK2Q07912 1038 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 TXNRD3Q86VQ6 643 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 ZNF354CQ86Y25 554 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 CRYGNQ8WXF5 182 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 PGBD4Q96DM1 585 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 HSD17B14Q9BPX1 270 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 PCDHAC1Q9H158 963 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 PARVAQ9NVD7 372 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 NHSQ6T4R5 1651 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 DPYSL3Q14195 570 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 ZBTB49Q6ZSB9 765 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 DAW1Q8N136 415 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 FEZF2Q8TBJ5 459 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 MARCH7Q9H992 704 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 SCUBE2Q9NQ36 999 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 MTMR4Q9NYA4 1195 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 WRAP73Q9P2S5 460 aaPredicted RBP19.09■□□□□ 0.65
PTPA-223ENST00000452489 SEPT3Q9UH03 358 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 VPS28Q9UK41 221 aa19.09■□□□□ 0.65
PTPA-223ENST00000452489 PTBP2Q9UKA9 531 aaKnown RBP19.09■□□□□ 0.65
PTPA-223ENST00000452489 MEIS2O14770 477 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 TBX3O15119 743 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 GCATO75600 419 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 CYP3A4P08684 503 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 POLR2EP19388 210 aaKnown RBP19.08■□□□□ 0.65
PTPA-223ENST00000452489 GRK2P25098 689 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 GMPRP36959 345 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 KRT39Q6A163 491 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 SIGIRRQ6IA17 410 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 TRMT10BQ6PF06 316 aaKnown RBP19.08■□□□□ 0.65
PTPA-223ENST00000452489 SLCO4A1Q96BD0 722 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 TMA16Q96EY4 203 aaKnown RBP19.08■□□□□ 0.65
PTPA-223ENST00000452489 FEM1CQ96JP0 617 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 HOXD1Q9GZZ0 328 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 PNPLA8Q9NP80 782 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 TBC1D14Q9P2M4 693 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 RABL2AQ9UBK7 228 aaPredicted RBP19.08■□□□□ 0.65
PTPA-223ENST00000452489 ZC3H7BQ9UGR2 993 aaKnown RBP19.08■□□□□ 0.65
PTPA-223ENST00000452489 PCDHA1Q9Y5I3 950 aa19.08■□□□□ 0.65
PTPA-223ENST00000452489 RGSL1A5PLK6 1076 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 CST8O60676 142 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 TGM1P22735 817 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 YAP1P46937 504 aaKnown RBP19.08■□□□□ 0.64
PTPA-223ENST00000452489 NOVP48745 357 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 YWHAZP63104 245 aaKnown RBP19.08■□□□□ 0.64
PTPA-223ENST00000452489 SMTNL2Q2TAL5 461 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 CCDC58Q4VC31 144 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 KIAA2013Q8IYS2 634 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 PGAM4Q8N0Y7 254 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 ZNF781Q8N8C0 355 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 TERB1Q8NA31 727 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 EGLN2Q96KS0 407 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 ZNF347Q96SE7 839 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 MOSPD1Q9UJG1 213 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 AGO2Q9UKV8 859 aaKnown RBP19.08■□□□□ 0.64
PTPA-223ENST00000452489 AGTPBP1Q9UPW5 1226 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 ZHX2Q9Y6X8 837 aa19.08■□□□□ 0.64
PTPA-223ENST00000452489 NTSR2O95665 410 aa19.07■□□□□ 0.64
PTPA-223ENST00000452489 CXCR2P25025 360 aa19.07■□□□□ 0.64
PTPA-223ENST00000452489 TTKP33981 857 aa19.07■□□□□ 0.64
PTPA-223ENST00000452489 GPC3P51654 580 aa19.07■□□□□ 0.64
PTPA-223ENST00000452489 DGKDQ16760 1214 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms