RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 MFSD3Q96ES6 412 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 APOPT1Q96IL0 206 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 B3GALT6Q96L58 329 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 XAB2Q9HCS7 855 aaKnown RBP11.46□□□□□ -0.57
DDR1-239ENST00000452441 PDLIM7Q9NR12 457 aa11.46□□□□□ -0.57
DDR1-239ENST00000452441 LOXHD1Q8IVV2 1947 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 DPPA5A6NC42 116 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 SEC24DO94855 1032 aaPredicted RBP11.46□□□□□ -0.58
DDR1-239ENST00000452441 THP07101 528 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 IRF1P10914 325 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 DNAJB2P25686 324 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 ATICP31939 592 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.58
DDR1-239ENST00000452441 KLC1Q07866 573 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 BST2Q10589 180 aaKnown RBP11.46□□□□□ -0.58
DDR1-239ENST00000452441 SOWAHAQ2M3V2 549 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 C15orf39Q6ZRI6 1047 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 TDRPQ86YL5 185 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 PPTC7Q8NI37 304 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 TMEM174Q8WUU8 243 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 BTBD10Q9BSF8 475 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 GPBP1L1Q9HC44 474 aaPredicted RBP11.46□□□□□ -0.58
DDR1-239ENST00000452441 ZFYVE28Q9HCC9 887 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 DOCK5Q9H7D0 1870 aa11.46□□□□□ -0.58
DDR1-239ENST00000452441 SMIM28A0A1B0GU29 152 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 ATP6AP2A0A1C7CYW4 349 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 ATP6AP2O75787 350 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 GJA5P36382 358 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 CTBP1Q13363 440 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 RALGPS1Q5JS13 557 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 THEMIS2Q5TEJ8 643 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 ANO7Q6IWH7 933 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 WDR60Q8WVS4 1066 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 AGAP2Q99490 1192 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 SPATS2LQ9NUQ6 558 aaKnown RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 MTO1Q9Y2Z2 717 aaKnown RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 NUMBLQ9Y6R0 609 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 BRCA2P51587 3418 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 CCDC189A1A4V9 331 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 TTC24A2A3L6 582 aaPredicted RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 C9JVG2 144 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 TADA2AO75478 443 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 ATG7O95352 703 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 STAMBPO95630 424 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 ETS2P15036 469 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 GNAZP19086 355 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 CD52P31358 61 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 TSPY1Q01534 308 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 OCRLQ01968 901 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 NSUN2Q08J23 767 aaKnown RBP eCLIP11.45□□□□□ -0.58
DDR1-239ENST00000452441 PRPSAP1Q14558 356 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 ANO4Q32M45 955 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 C10orf107Q8IVU9 208 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 SCUBE1Q8IWY4 988 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 FBXO27Q8NI29 283 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 UCMAQ8WVF2 138 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 SENP8Q96LD8 212 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 MIPEPQ99797 713 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 CADM1Q9BY67 442 aaKnown RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 DCLRE1BQ9H816 532 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 CORO1CQ9ULV4 474 aaPredicted RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 DRG1Q9Y295 367 aaKnown RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 UBA6A0AVT1 1052 aaPredicted RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 SDR42E2A6NKP2 422 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 CCR10P46092 362 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 MAXP61244 160 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 STILQ15468 1287 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 TMEM259Q4ZIN3 620 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 LDB1Q86U70 411 aaPredicted RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 SLC35B2Q8TB61 432 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 SKA2Q8WVK7 121 aaPredicted RBP11.45□□□□□ -0.58
DDR1-239ENST00000452441 CATSPER2Q96P56 530 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 WDCPQ9H6R7 721 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 SYBUQ9NX95 663 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 ADAMTS5Q9UNA0 930 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 CDY2AQ9Y6F7 541 aa11.45□□□□□ -0.58
DDR1-239ENST00000452441 MEIS3P2A8K0S8 358 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 VAPBO95292 243 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 POLBP06746 335 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SP100P23497 879 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 EPHA3P29320 983 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SLC1A6P48664 564 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SLC25A11Q02978 314 aaKnown RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 TSTA3Q13630 321 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 KYAT1Q16773 422 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 EFHC1Q5JVL4 640 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 IQSEC1Q6DN90 963 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 RPS27LQ71UM5 84 aaKnown RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 ICA1LQ8NDH6 482 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 RBM15BQ8NDT2 890 aaKnown RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.581e-7■■■■□ 23.7
DDR1-239ENST00000452441 ALKBH8Q96BT7 664 aaKnown RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 ZMAT2Q96NC0 199 aaKnown RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 ADAM2Q99965 735 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 SYT15Q9BQS2 421 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 COL2A1P02458 1487 aaPredicted RBP11.44□□□□□ -0.58
DDR1-239ENST00000452441 MFSD11O43934 449 aa11.44□□□□□ -0.58
DDR1-239ENST00000452441 RALBP11234 206 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms