RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 TYW5A2RUC4 315 aaKnown RBP20.62■□□□□ 0.89
COL9A3-202ENST00000452372 F5H5T6 163 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 MFAP3LO75121 409 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 FAM228BP0C875 321 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 GPD1P21695 349 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 RPL7AP62424 266 aaKnown RBP20.62■□□□□ 0.89
COL9A3-202ENST00000452372 RPS24P62847 133 aaKnown RBP20.62■□□□□ 0.89
COL9A3-202ENST00000452372 MAMLD1Q13495 774 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 C15orf59Q2T9L4 293 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-202ENST00000452372 HSF5Q4G112 596 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-202ENST00000452372 DCUN1D2Q6PH85 259 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 TMC6Q7Z403 805 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 ZNF557Q8N988 423 aaPredicted RBP20.62■□□□□ 0.89
COL9A3-202ENST00000452372 ACDQ96AP0 544 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 MCEEQ96PE7 176 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 ANLNQ9NQW6 1124 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 ABHD10Q9NUJ1 306 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 ZNHIT6Q9NWK9 470 aaKnown RBP20.62■□□□□ 0.89
COL9A3-202ENST00000452372 USP18Q9UMW8 372 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 HS3ST4Q9Y661 456 aa20.62■□□□□ 0.89
COL9A3-202ENST00000452372 CCDC163A0A0D9SF12 145 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 PRR5-ARHGAP8B1AHC4 643 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 I6L893 689 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 MYBL1P10243 752 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 TIE1P35590 1138 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 ZNF75DP51815 510 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 ZNF143P52747 638 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 ADKP55263 362 aaKnown RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 ARHGAP8P85298 464 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 LMNB2Q03252 620 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 AUHQ13825 339 aaKnown RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 CDO1Q16878 200 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 GEN1Q17RS7 908 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 ACBD5Q5T8D3 534 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 SH3PXD2AQ5TCZ1 1133 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 ANKS1BQ7Z6G8 1248 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 KIAA0907Q7Z7F0 614 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 CNGA4Q8IV77 575 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 CFAP52Q8N1V2 620 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 FAM160A2Q8N612 972 aaPredicted RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 IL17RCQ8NAC3 791 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 FIBINQ8TAL6 211 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 TRIM11Q96F44 468 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 MRFAP1L1Q96HT8 127 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 C1orf74Q96LT6 269 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 STIM2Q9P246 746 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 CNOT8Q9UFF9 292 aaKnown RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 HCN2Q9UL51 889 aa20.61■□□□□ 0.89
COL9A3-202ENST00000452372 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.61■□□□□ 0.89
COL9A3-202ENST00000452372 AKR1B15C9JRZ8 316 aaPredicted RBP20.6■□□□□ 0.89
COL9A3-202ENST00000452372 LRP3O75074 770 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 HLA-FP30511 346 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 EIF4A3P38919 411 aaKnown RBP20.6■□□□□ 0.89
COL9A3-202ENST00000452372 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
COL9A3-202ENST00000452372 FBXL22Q6P050 247 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 ALKBH5Q6P6C2 394 aaKnown RBP20.6■□□□□ 0.89
COL9A3-202ENST00000452372 FAM131BQ86XD5 332 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 MFN1Q8IWA4 741 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 ALLCQ8N6M5 410 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL9A3-202ENST00000452372 ZNF513Q8N8E2 541 aaPredicted RBP20.6■□□□□ 0.89
COL9A3-202ENST00000452372 FAM172AQ8WUF8 416 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 HAPLN3Q96S86 360 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 CNPY3Q9BT09 278 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 SIK2Q9H0K1 926 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 SEMA4GQ9NTN9 838 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 MMP17Q9ULZ9 603 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 SLC8A2Q9UPR5 921 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 ABCA7Q8IZY2 2146 aa20.6■□□□□ 0.89
COL9A3-202ENST00000452372 SSU72P8A0A1W2PR75 194 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 ATMINO43313 823 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-202ENST00000452372 TIMM44O43615 452 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 HDAC4P56524 1084 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 DMC1Q14565 340 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 EIF4HQ15056 248 aaKnown RBP20.59■□□□□ 0.89
COL9A3-202ENST00000452372 ASTE1Q2TB18 679 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-202ENST00000452372 C5orf22Q49AR2 442 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 RAB6CQ53S08 254 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 RABGAP1LQ5R372 815 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 TTC39BQ5VTQ0 682 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-202ENST00000452372 TRMT11Q7Z4G4 463 aaKnown RBP20.59■□□□□ 0.89
COL9A3-202ENST00000452372 C14orf80Q86SX3 495 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 CCDC117Q8IWD4 279 aaPredicted RBP20.59■□□□□ 0.89
COL9A3-202ENST00000452372 CCDC33Q8N5R6 958 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 CAMKK1Q8N5S9 505 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 TXNDC5Q8NBS9 432 aaKnown RBP20.59■□□□□ 0.89
COL9A3-202ENST00000452372 WFDC5Q8TCV5 224 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 WFIKKN2Q8TEU8 576 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 GAB3Q8WWW8 586 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 IGSF8Q969P0 613 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 ZNF653Q96CK0 615 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 RAB6CQ9H0N0 254 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 ABCB8Q9NUT2 735 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 ELOVL2Q9NXB9 296 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 VANGL2Q9ULK5 521 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 NENFQ9UMX5 172 aa20.59■□□□□ 0.89
COL9A3-202ENST00000452372 TMEM191CA6NGB0 347 aa20.58■□□□□ 0.89
COL9A3-202ENST00000452372 LUC7L3O95232 432 aaKnown RBP20.58■□□□□ 0.89
COL9A3-202ENST00000452372 KLF8O95600 359 aaPredicted RBP20.58■□□□□ 0.89
COL9A3-202ENST00000452372 HNRNPLP14866 589 aaKnown RBP eCLIP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms