RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CD160O95971 181 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 TOP3BO95985 862 aaKnown RBP6.79□□□□□ -1.32
USP46-202ENST00000451218 GARSP41250 739 aaKnown RBP6.79□□□□□ -1.32
USP46-202ENST00000451218 YWHAGP61981 247 aaKnown RBP eCLIP6.79□□□□□ -1.32
USP46-202ENST00000451218 LMNB2Q03252 620 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 DDR2Q16832 855 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 FAM133BQ5BKY9 247 aaKnown RBP6.79□□□□□ -1.32
USP46-202ENST00000451218 CYS1Q717R9 158 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 ZBED8Q8IZ13 594 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 RIN3Q8TB24 985 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 SLC7A14Q8TBB6 771 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 GPR152Q8TDT2 470 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 SYNCQ9H7C4 482 aa6.79□□□□□ -1.32
USP46-202ENST00000451218 A0A0A0MRY4 1105 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 WISP3O95389 354 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 FAM107AO95990 144 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 F7P08709 466 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 TSHRP16473 764 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 PAX3P23760 479 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 GMPRP36959 345 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 HIF1AQ16665 826 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 KRT71Q3SY84 523 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 FBF1Q8TES7 1133 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 DEPDC1BQ8WUY9 529 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 HTR3CQ8WXA8 447 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 FATE1Q969F0 183 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 FUBP3Q96I24 572 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP46-202ENST00000451218 PRICKLE1Q96MT3 831 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 SPATA13Q96N96 652 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 TOX2Q96NM4 488 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 IL12RB2Q99665 862 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 C20orf27Q9GZN8 174 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 TKTL2Q9H0I9 626 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP46-202ENST00000451218 DSEQ9UL01 958 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 INPP5FQ9Y2H2 1132 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 RASGRF2O14827 1237 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 TBX18O95935 607 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 SLC6A4P31645 630 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 DEFB103AP81534 67 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 YWHAHQ04917 246 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 PDIA2Q13087 525 aaKnown RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 ZSCAN26Q16670 478 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 PPP6R3Q5H9R7 873 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 TADA2BQ86TJ2 420 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 PGBD4Q96DM1 585 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 HAPLN3Q96S86 360 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 CCT8L2Q96SF2 557 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 FTHL17Q9BXU8 183 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 SPC25Q9HBM1 224 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 SSU72Q9NP77 194 aaKnown RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 CASS4Q9NQ75 786 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 LAMA1P25391 3075 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 HACD1B0YJ81 288 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 E7EVH7 732 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 SKIP12755 728 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 DESP17661 470 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 TAC1P20366 129 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 FRG1Q14331 258 aaKnown RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 C6orf118Q5T5N4 469 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 ATAD1Q8NBU5 361 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 SH3RF2Q8TEC5 729 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 IGSF8Q969P0 613 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 FEZ2Q9UHY8 353 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 HEY1Q9Y5J3 304 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 TMEM120BA0PK00 339 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 DRGXA6NNA5 263 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 MUSKO15146 869 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 SBK3P0C264 359 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 HAPLN1P10915 354 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 NCAM1P13591 858 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 CAPN2P17655 700 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 PSMB4P28070 264 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 PCSK1P29120 753 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 CYP2C18P33260 490 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 RPA3P35244 121 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 GPR17Q13304 367 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 KBTBD12Q3ZCT8 623 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 ALFQ53S48 1182 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 MS4A13Q5J8X5 152 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 PRSS55Q6UWB4 352 aaPredicted RBP6.78□□□□□ -1.32
USP46-202ENST00000451218 DSTYKQ6XUX3 929 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 TEX26Q8N6G2 289 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 ZNF454Q8N9F8 522 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 CKAP2Q8WWK9 683 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 ZNF778Q96MU6 729 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 DEFB118Q96PH6 123 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 BRD8Q9H0E9 1235 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 GMIPQ9P107 970 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 MTRRQ9UBK8 725 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 COL6A3P12111 3177 aa6.78□□□□□ -1.32
USP46-202ENST00000451218 NT5C1B-RDH14C9J2C7 533 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 RNF103O00237 685 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 MCF2LO15068 1137 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 ZBTB24O43167 697 aaPredicted RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 ARHGEF15O94989 841 aa6.77□□□□□ -1.33
USP46-202ENST00000451218 ALDOAP04075 364 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 SSR1P43307 286 aaKnown RBP6.77□□□□□ -1.33
USP46-202ENST00000451218 TIAL1Q01085 375 aaKnown RBP eCLIP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms