RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TMEM110Q86TL2 294 aa28.11■■■□□ 2.09
USP42-204ENST00000451154 ZNF557Q8N988 423 aaPredicted RBP28.11■■■□□ 2.09
USP42-204ENST00000451154 MYO19Q96H55 970 aa28.11■■■□□ 2.09
USP42-204ENST00000451154 BTBD1Q9H0C5 482 aa28.11■■■□□ 2.09
USP42-204ENST00000451154 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.11■■■□□ 2.09
USP42-204ENST00000451154 MSRB2Q9Y3D2 182 aa28.11■■■□□ 2.09
USP42-204ENST00000451154 TYW5A2RUC4 315 aaKnown RBP28.1■■■□□ 2.09
USP42-204ENST00000451154 H0Y626 953 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 TRIM16O95361 564 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 SEMA4FO95754 770 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 SLC9A1P19634 815 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 GNA15P30679 374 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 MATKP42679 507 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 ST8SIA6P61647 398 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 BEND5Q7L4P6 421 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 LGI2Q8N0V4 545 aa28.1■■■□□ 2.09
USP42-204ENST00000451154 FNDC3AQ9Y2H6 1198 aaKnown RBP28.1■■■□□ 2.09
USP42-204ENST00000451154 USP8P40818 1118 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 CTSOP43234 321 aaPredicted RBP28.09■■■□□ 2.09
USP42-204ENST00000451154 APBA1Q02410 837 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 CDH18Q13634 790 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 TAF5Q15542 800 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 CAMK4Q16566 473 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 ARHGAP44Q17R89 818 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 ZNF423Q2M1K9 1284 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 ZNF776Q68DI1 518 aaPredicted RBP28.09■■■□□ 2.09
USP42-204ENST00000451154 CCDC117Q8IWD4 279 aaPredicted RBP28.09■■■□□ 2.09
USP42-204ENST00000451154 SETD7Q8WTS6 366 aaKnown RBP28.09■■■□□ 2.09
USP42-204ENST00000451154 BIRC7Q96CA5 298 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 MRGPRX3Q96LB0 322 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 MED15Q96RN5 788 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 RSPH9Q9H1X1 276 aaPredicted RBP28.09■■■□□ 2.09
USP42-204ENST00000451154 POPDC2Q9HBU9 364 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 TJP2Q9UDY2 1190 aa28.09■■■□□ 2.09
USP42-204ENST00000451154 SIN3BO75182 1162 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 FSBPO95073 299 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 CER1O95813 267 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 AFF3P51826 1226 aaKnown RBP28.08■■■□□ 2.09
USP42-204ENST00000451154 YWHAZP63104 245 aaKnown RBP28.08■■■□□ 2.09
USP42-204ENST00000451154 PITX1P78337 314 aaPredicted RBP28.08■■■□□ 2.09
USP42-204ENST00000451154 PITRM1Q5JRX3 1037 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 RAP1GAP2Q684P5 730 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 TRIM65Q6PJ69 517 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 IL27RAQ6UWB1 636 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 ENOSF1Q7L5Y1 443 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 RAB44Q7Z6P3 723 aaPredicted RBP28.08■■■□□ 2.09
USP42-204ENST00000451154 DHX40Q8IX18 779 aaKnown RBP28.08■■■□□ 2.09
USP42-204ENST00000451154 PNPLA1Q8N8W4 532 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 GANCQ8TET4 914 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 TRIM62Q9BVG3 475 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 TM7SF3Q9NS93 570 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 KIAA1468Q9P260 1216 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 RWDD2AQ9UIY3 292 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 RALYQ9UKM9 306 aaKnown RBP28.08■■■□□ 2.09
USP42-204ENST00000451154 ERVW-1Q9UQF0 538 aa28.08■■■□□ 2.09
USP42-204ENST00000451154 BECN2A8MW95 431 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 CBFA2T3O75081 653 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 LUC7L3O95232 432 aaKnown RBP28.07■■■□□ 2.08
USP42-204ENST00000451154 TRUB2O95900 331 aaKnown RBP28.07■■■□□ 2.08
USP42-204ENST00000451154 APOEP02649 317 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 ASLP04424 464 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 TACR2P21452 398 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 MEA1Q16626 185 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 KIF19Q2TAC6 998 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 HNRNPA1L2Q32P51 320 aaKnown RBP28.07■■■□□ 2.08
USP42-204ENST00000451154 TTC31Q49AM3 519 aaPredicted RBP28.07■■■□□ 2.08
USP42-204ENST00000451154 THAP9Q9H5L6 903 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 SGK2Q9HBY8 427 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 PCOLCE2Q9UKZ9 415 aa28.07■■■□□ 2.08
USP42-204ENST00000451154 TMEM8BA6NDV4 472 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 TTC34A8MYJ7 566 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 FTH1P19P0C7X4 201 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 C9orf64Q5T6V5 341 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 CHSY1Q86X52 802 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 APCDD1Q8J025 514 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 WDTC1Q8N5D0 677 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 PABPC3Q9H361 631 aaKnown RBP28.06■■■□□ 2.08
USP42-204ENST00000451154 TM9SF3Q9HD45 589 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 KIAA1522Q9P206 1035 aaPredicted RBP28.06■■■□□ 2.08
USP42-204ENST00000451154 SLCO3A1Q9UIG8 710 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 NCKAP1Q9Y2A7 1128 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 SNX11Q9Y5W9 270 aa28.06■■■□□ 2.08
USP42-204ENST00000451154 FAM221BA6H8Z2 402 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 KCNK3O14649 394 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 IGLV3-25P01717 112 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 ZNF883P0CG24 379 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 NUMBP49757 651 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 PDCLQ13371 301 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 GBP6Q6ZN66 633 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 BTN2A3PQ96KV6 586 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 FBXL12Q9NXK8 326 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 ANKRD6Q9Y2G4 727 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 CEP83Q9Y592 693 aa28.05■■■□□ 2.08
USP42-204ENST00000451154 DSPP15924 2871 aaKnown RBP28.04■■■□□ 2.08
USP42-204ENST00000451154 FAM47DPA6NHR8 397 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 RNASEH1O60930 286 aaKnown RBP28.04■■■□□ 2.08
USP42-204ENST00000451154 MOCS3O95396 460 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 CD27P26842 260 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 ECT2LQ008S8 904 aa28.04■■■□□ 2.08
USP42-204ENST00000451154 TEAD4Q15561 434 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms