RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
SGCE-208ENST00000450385 PDCL3Q9H2J4 239 aa16.59■□□□□ 0.25
SGCE-208ENST00000450385 SMOC1Q9H4F8 434 aa16.59■□□□□ 0.25
SGCE-208ENST00000450385 CAPN10Q9HC96 672 aa16.59■□□□□ 0.25
SGCE-208ENST00000450385 SAMSN1Q9NSI8 373 aaKnown RBP16.59■□□□□ 0.25
SGCE-208ENST00000450385 TMEM74BQ9NUR3 256 aa16.59■□□□□ 0.25
SGCE-208ENST00000450385 DDIT4Q9NX09 232 aa16.59■□□□□ 0.25
SGCE-208ENST00000450385 ASCC3Q8N3C0 2202 aaKnown RBP16.59■□□□□ 0.25
SGCE-208ENST00000450385 NCOR2Q9Y618 2525 aa16.59■□□□□ 0.25
SGCE-208ENST00000450385 GOLGA6L7A0A1B0GV03 622 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 C4orf47A7E2U8 309 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 H0Y626 953 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 RNASEH1O60930 286 aaKnown RBP16.58■□□□□ 0.24
SGCE-208ENST00000450385 CYP11B1P15538 503 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 TACR2P21452 398 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 PRKCHP24723 683 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 PLK1P53350 603 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 SLC14A1Q13336 389 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 HNRNPDQ14103 355 aaKnown RBP16.58■□□□□ 0.24
SGCE-208ENST00000450385 BRMS1LQ5PSV4 323 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 FKBP15Q5T1M5 1219 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 OR6B2Q6IFH4 312 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 TCEAL6Q6IPX3 200 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 SND1Q7KZF4 910 aaKnown RBP eCLIP16.58■□□□□ 0.241e-6■■■■□ 24
SGCE-208ENST00000450385 DEFB106AQ8N104 65 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 TCEAL3Q969E4 200 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 RNF34Q969K3 372 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 NT5C3BQ969T7 300 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 TOE1Q96GM8 510 aaKnown RBP16.58■□□□□ 0.24
SGCE-208ENST00000450385 NUCKS1Q9H1E3 243 aaKnown RBP16.58■□□□□ 0.24
SGCE-208ENST00000450385 FAM204AQ9H8W3 233 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 TPX2Q9ULW0 747 aaKnown RBP16.58■□□□□ 0.24
SGCE-208ENST00000450385 STAP1Q9ULZ2 295 aa16.58■□□□□ 0.24
SGCE-208ENST00000450385 A0A1B0GVM2 712 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 TCAF2A6NFQ2 919 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 METTL12A8MUP2 240 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 DAB1O75553 588 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 CD70P32970 193 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 NNMTP40261 264 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 SGSHP51688 502 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 ATXN3P54252 364 aaPredicted RBP16.57■□□□□ 0.24
SGCE-208ENST00000450385 RPS24P62847 133 aaKnown RBP16.57■□□□□ 0.24
SGCE-208ENST00000450385 APBA1Q02410 837 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 RAPGEF1Q13905 1077 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 C5orf22Q49AR2 442 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 FAM183BPQ6ZVS7 135 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 USP30Q70CQ3 517 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 CHSY1Q86X52 802 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 ERICH1Q86X53 443 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 SLC41A1Q8IVJ1 513 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 LGI2Q8N0V4 545 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 ADAM32Q8TC27 787 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 SORCS1Q8WY21 1168 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 HSPA12BQ96MM6 686 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 PRICKLE1Q96MT3 831 aaPredicted RBP16.57■□□□□ 0.24
SGCE-208ENST00000450385 PRMT1Q99873 361 aaKnown RBP16.57■□□□□ 0.24
SGCE-208ENST00000450385 SGK2Q9HBY8 427 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 STIM2Q9P246 746 aa16.57■□□□□ 0.24
SGCE-208ENST00000450385 MUC22E2RYF6 1773 aaPredicted RBP16.56■□□□□ 0.24
SGCE-208ENST00000450385 ITIH6Q6UXX5 1313 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 A0A1B0GTW7 788 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 PATE3B3GLJ2 98 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 ARHGAP33O14559 1287 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 KCNK5O95279 499 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 MOCS2O96007 188 aaPredicted RBP16.56■□□□□ 0.24
SGCE-208ENST00000450385 DNTTP04053 509 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 ENGP17813 658 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 CSKP41240 450 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 ECT2LQ008S8 904 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 TAF5Q15542 800 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 HNRNPA1L2Q32P51 320 aaKnown RBP16.56■□□□□ 0.24
SGCE-208ENST00000450385 TTC31Q49AM3 519 aaPredicted RBP16.56■□□□□ 0.24
SGCE-208ENST00000450385 PTPN20Q4JDL3 420 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 PASD1Q8IV76 773 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 RGL4Q8IZJ4 473 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 CARNMT1Q8N4J0 409 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 HDDC3Q8N4P3 179 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 GPT2Q8TD30 523 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 CYB5D2Q8WUJ1 264 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 C1orf74Q96LT6 269 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 RSPH9Q9H1X1 276 aaPredicted RBP16.56■□□□□ 0.24
SGCE-208ENST00000450385 SLC32A1Q9H598 525 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 RETREG1Q9H6L5 497 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 OSGEPQ9NPF4 335 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 PRSS16Q9NQE7 514 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.24
SGCE-208ENST00000450385 NCKAP1Q9Y2A7 1128 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 FHOD1Q9Y613 1164 aa16.56■□□□□ 0.24
SGCE-208ENST00000450385 F8VZ95 297 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 CLDN11O75508 207 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 ERBB2P04626 1255 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 CFIP05156 583 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 CXCR3P49682 368 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 SHC2P98077 582 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 MYL5Q02045 173 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 KRT31Q15323 416 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 STX1AQ16623 288 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 PLEKHG6Q3KR16 790 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 SLC25A52Q3SY17 297 aa16.55■□□□□ 0.24
SGCE-208ENST00000450385 PITRM1Q5JRX3 1037 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms