RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 VPS45Q9NRW7 570 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 CALCOCO1Q9P1Z2 691 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 TJP2Q9UDY2 1190 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 STON1Q9Y6Q2 735 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 A0A087X0T9 212 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 E5RJQ4 531 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 FAM228BP0C875 321 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 UNGP13051 313 aaPredicted RBP17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 HOXD9P28356 352 aaPredicted RBP17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 RPL34P49207 117 aaKnown RBP17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 CCZ1BP86790 482 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 CCZ1P86791 482 aaPredicted RBP17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 FOXK2Q01167 660 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 CENPCQ03188 943 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 GFPT1Q06210 699 aaPredicted RBP17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 ADGRF1Q5T601 910 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 SYPL2Q5VXT5 272 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 C11orf74Q86VG3 221 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 C1orf131Q8NDD1 294 aaKnown RBP17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 DQX1Q8TE96 717 aaKnown RBP17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 PIGKQ92643 395 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 TRIM11Q96F44 468 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 SPACA7Q96KW9 195 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 CIPCQ9C0C6 399 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 SYNCQ9H7C4 482 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 CD248Q9HCU0 757 aa17.67■□□□□ 0.42
PRPF40A-204ENST00000450303 PLXND1Q9Y4D7 1925 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC30A4O14863 429 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 ZBTB24O43167 697 aaPredicted RBP17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 PAPSS1O43252 624 aaPredicted RBP17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 IGLV3-27P01718 113 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 NDUFV2P19404 249 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC6A4P31645 630 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 IL12RB1P42701 662 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 TMEM215Q68D42 235 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 RAD9BQ6WBX8 426 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 LPCAT2Q7L5N7 544 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 CYP2U1Q7Z449 544 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 ANKS1BQ7Z6G8 1248 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 PHF13Q86YI8 300 aaPredicted RBP17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 WDTC1Q8N5D0 677 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 UCMAQ8WVF2 138 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 CPA5Q8WXQ8 436 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 VCPIP1Q96JH7 1222 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 PPP1R13BQ96KQ4 1090 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC2A11Q9BYW1 496 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 CD93Q9NPY3 652 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 ELOVL2Q9NXB9 296 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 THAP10Q9P2Z0 257 aaPredicted RBP17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 STOML2Q9UJZ1 356 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 GON4LQ3T8J9 2241 aa17.66■□□□□ 0.42
PRPF40A-204ENST00000450303 TMCO5BA8MYB1 307 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 PATE3B3GLJ2 98 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 KIF2AO00139 706 aaPredicted RBP17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 GFRA2O00451 464 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 CAPN9O14815 690 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 ACSL4O60488 711 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 FOXD2O60548 495 aaPredicted RBP17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 TBL1XO60907 577 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 LCA5LO95447 670 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 LATS1O95835 1130 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 FTLP02792 175 aaPredicted RBP17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 CALB1P05937 261 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 PTGER3P43115 390 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 MAGEA1P43355 309 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC11A2P49281 568 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 PDCLQ13371 301 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 BYSLQ13895 437 aaKnown RBP17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 ZNF234Q14588 700 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 TAF5Q15542 800 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 NADSYN1Q6IA69 706 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 KIAA1324Q6UXG2 1013 aaKnown RBP17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 TMEM110Q86TL2 294 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 TAC4Q86UU9 113 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 UNC45BQ8IWX7 931 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 C18orf8Q96DM3 657 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 FCRL2Q96LA5 508 aaPredicted RBP17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 ISCUQ9H1K1 167 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 ADAM22Q9P0K1 906 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 STIM2Q9P246 746 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 CYP8B1Q9UNU6 501 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 CACNA1AO00555 2505 aa17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 TNRC6BQ9UPQ9 1833 aaKnown RBP17.65■□□□□ 0.42
PRPF40A-204ENST00000450303 FAM170AA1A519 330 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 SART1O43290 800 aaKnown RBP17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 MOCS2O96007 188 aaPredicted RBP17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 H2AFZP0C0S5 128 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 MYBL1P10243 752 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 HLA-FP30511 346 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 PITX1P78337 314 aaPredicted RBP17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 C1QBPQ07021 282 aaKnown RBP17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 FAM133BQ5BKY9 247 aaKnown RBP17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 PIK3R6Q5UE93 754 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 NUGGCQ68CJ6 796 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 H2AFVQ71UI9 128 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 WFDC5Q8TCV5 224 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 MYEOVQ96EZ4 313 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 MRGPRX1Q96LB2 322 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 SERPINB11Q96P15 392 aa17.64■□□□□ 0.41
PRPF40A-204ENST00000450303 CPXM1Q96SM3 734 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms