RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 DHX34Q14147 1143 aaKnown RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 NOMO1Q15155 1222 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CCNG2Q16589 344 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SLC5A9Q2M3M2 681 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ARHGAP15Q53QZ3 475 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 PRSS36Q5K4E3 855 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 STXBP5Q5T5C0 1151 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 TTC27Q6P3X3 843 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CCDC137Q6PK04 289 aaKnown RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CHSY1Q86X52 802 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 FBXL6Q8N531 539 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ARL14EPQ8N8R7 260 aaPredicted RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ACTL9Q8TC94 416 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 MAGOHBQ96A72 148 aaKnown RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 TCEAL4Q96EI5 215 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SLC22A12Q96S37 553 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 FAM118BQ9BPY3 351 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 KLF16Q9BXK1 252 aaPredicted RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 FRMD8P1Q9BZ68 369 aaPredicted RBP13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SLC12A6Q9UHW9 1150 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 EPG5Q9HCE0 2579 aa13.12□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CCDC195A0A1B0GUA6 201 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 E9PAM4 449 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 FGF10O15520 208 aaPredicted RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 DAPK3O43293 454 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 MOSPD3O75425 235 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 AMPD1P23109 780 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CORO1AP31146 461 aaKnown RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 COILP38432 576 aaPredicted RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 HARS2P49590 506 aaKnown RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 NTHL1P78549 312 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SLC7A9P82251 487 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 DR1Q01658 176 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 HYAL1Q12794 435 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 TEAD2Q15562 447 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 GLE1Q53GS7 698 aaKnown RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 RAP1GAP2Q684P5 730 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 DRICH1Q6PGQ1 229 aaPredicted RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 GRASPQ7Z6J2 395 aaPredicted RBP13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 MAB21L3Q8N8X9 362 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CCDC114Q96M63 670 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ANKZF1Q9H8Y5 726 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 PIDD1Q9HB75 910 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ETNK2Q9NVF9 386 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 PCYOX1Q9UHG3 505 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 AMACRQ9UHK6 382 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 MFHAS1Q9Y4C4 1052 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CPQQ9Y646 472 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 COL4A3Q01955 1670 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
HLA-DRB9-201ENST00000449413 PROB1E7EW31 1015 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 TTI1O43156 1089 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ACSL4O60488 711 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ECEL1O95672 775 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 LATS1O95835 1130 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CEBPBP17676 345 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ERCC2P18074 760 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 HDCP19113 662 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 EPHB2P29323 1055 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SERPINB6P35237 376 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SLC11A2P49281 568 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ZXDAP98168 799 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SNX1Q13596 522 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 BYSLQ13895 437 aaKnown RBP13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 PAFAH1B3Q15102 231 aaKnown RBP13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 OASLQ15646 514 aaKnown RBP13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ARTNQ5T4W7 220 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 NADSYN1Q6IA69 706 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 C1orf228Q6PIY5 440 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 TMCO3Q6UWJ1 677 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 TMC5Q6UXY8 1006 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CCDC105Q8IYK2 499 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ZNF683Q8IZ20 524 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 EFHBQ8N7U6 833 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 C12orf76Q8N812 135 aaPredicted RBP13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 CCDC26Q8TAB7 109 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SLC35B2Q8TB61 432 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 GRK7Q8WTQ7 553 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 RUBCNQ92622 972 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 P3H4Q92791 437 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 SLCO2A1Q92959 643 aa13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 NKD2Q969F2 451 aaPredicted RBP13.1□□□□□ -0.31
HLA-DRB9-201ENST00000449413 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms